RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CEP41Q9BYV8 373 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 TMEM134Q9H6X4 195 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ZBTB20Q9HC78 741 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 CASS4Q9NQ75 786 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 SDR39U1Q9NRG7 319 aaPredicted RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 PIH1D1Q9NWS0 290 aaKnown RBP12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
CNKSR3-204ENST00000479339 ATP6V1G2-DDX39BF2Z307 99 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 NDUFA2O43678 99 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 GPR37L1O60883 481 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 MICAL2O94851 1124 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 HOXB1P14653 301 aaPredicted RBP12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ZNF30P17039 623 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 SOX6P35712 828 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 CTSKP43235 329 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ABCG1P45844 678 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 PPP3CCP48454 512 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 GZMKP49863 264 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 MAPK12P53778 367 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 KEAP1Q14145 624 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ARMC4Q5T2S8 1044 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 B3GNT8Q7Z7M8 397 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ITFG1Q8TB96 612 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 LRRN4Q8WUT4 740 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 DEDD2Q8WXF8 326 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ZNF578Q96N58 590 aaPredicted RBP12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 LRRC3Q9BY71 257 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 RANGRFQ9HD47 186 aaPredicted RBP12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 KLK14Q9P0G3 267 aa12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
CNKSR3-204ENST00000479339 NCOR1O75376 2440 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 K7ERI5 159 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SSX4O60224 188 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 AP2A1O95782 977 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 FADS2O95864 444 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 C1QBP02746 253 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 ALPPP05187 535 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 ANXA6P08133 673 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 HLA-DMAP28067 261 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 ARMCX4Q5H9R4 360 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 METTL2BQ6P1Q9 378 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 EFL1Q7Z2Z2 1120 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 EID3Q8N140 333 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 OR52K1Q8NGK4 314 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 OR5K1Q8NHB7 308 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 TOE1Q96GM8 510 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 PDLIM5Q96HC4 596 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 C11orf16Q9NQ32 467 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 RCOR3Q9P2K3 495 aaPredicted RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 M0QYV0 167 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 MEN1O00255 615 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 AP3D1O14617 1153 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 DSCR3O14972 297 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 HUS1O60921 280 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 KCNJ13O60928 360 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 VPS4BO75351 444 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SERPINF2P08697 491 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 CSTF2P33240 577 aaKnown RBP eCLIP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 PIK3CBP42338 1070 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 CBX5P45973 191 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 CDH13P55290 713 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 KCNK10P57789 538 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 EMX2Q04743 252 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 EFR3AQ14156 821 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 RABL3Q5HYI8 236 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SYVN1Q86TM6 617 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 GPR65Q8IYL9 337 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 TP53I13Q8NBR0 393 aaPredicted RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 CSPG4P5Q96PW8 444 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 GTPBP2Q9BX10 602 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 AKTIPQ9H8T0 292 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 SNX7Q9UNH6 387 aa12.86□□□□□ -0.35
CNKSR3-204ENST00000479339 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms