RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMEM202A6NGA9 273 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 TRIM64A6NGJ6 449 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CXCR6O00574 342 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 HS6ST1O60243 411 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 DIRAS1O95057 198 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 PRSS23O95084 383 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 DCKP27707 260 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 AKT1P31749 480 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ALDH3A2P51648 485 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 RAB33AQ14088 237 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SPIDRQ14159 915 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 PON2Q15165 354 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CCNYL2Q5T2Q4 361 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 XAF1Q6GPH4 301 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 Q6ZVU0 165 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 TMEM25Q86YD3 366 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SNX29P2Q8IUI4 249 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SELENOMQ8WWX9 145 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SLC47A1Q96FL8 570 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MBOAT4Q96T53 435 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ZBTB18Q99592 522 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 P2RY13Q9BPV8 354 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CCDC90BQ9GZT6 254 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MUC13Q9H3R2 512 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CLMPQ9H6B4 373 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CD320Q9NPF0 282 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 VNN3Q9NY84 501 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 WARS2Q9UGM6 360 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 SH3BP1Q9Y3L3 701 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ELOVL7A1L3X0 281 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 MITFO75030 526 aaPredicted RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 DEAF1O75398 565 aaPredicted RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 WDR47O94967 919 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CLDN9O95484 217 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SERPINA1P01009 418 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CCR2P41597 374 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 HLCSP50747 726 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CCR3P51677 355 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 HTRA3P83110 453 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 PTCHD3Q3KNS1 767 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 RUNDC3AQ59EK9 446 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 CACHD1Q5VU97 1274 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 PIWIL3Q7Z3Z3 882 aaKnown RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 NECAB2Q7Z6G3 386 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ZDHHC13Q8IUH4 622 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ALDH16A1Q8IZ83 802 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 LILRA3Q8N6C8 439 aaPredicted RBP10.54□□□□□ -0.72
VPS52-217ENST00000478934 CDC26Q8NHZ8 85 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ADAMTS16Q8TE57 1224 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 ACDQ96AP0 544 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 APOLD1Q96LR9 279 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 HTATIP2Q9BUP3 242 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 SLC46A2Q9BY10 475 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 C1orf109Q9NX04 203 aa10.54□□□□□ -0.72
VPS52-217ENST00000478934 OR2AG2A6NM03 316 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 IFRD1O00458 451 aaPredicted RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 TOR1BO14657 336 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 TGM5O43548 720 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 XPNPEP2O43895 674 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 OLFM2O95897 454 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 IGSF6O95976 241 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 NPPAP01160 153 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 CXCL10P02778 98 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 URODP06132 367 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 HTR1AP08908 422 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 C1SP09871 688 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 EBLN1P0CF75 366 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 SERPINA4P29622 427 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 ALDH4A1P30038 563 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 LSM3P62310 102 aaKnown RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 NFATC3Q12968 1075 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 KCNAB2Q13303 367 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 SPATS1Q496A3 300 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 OR4F3Q6IEY1 312 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 BTLAQ7Z6A9 289 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 OR8J3Q8NGG0 315 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 CNIH3Q8TBE1 160 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 PNPT1Q8TCS8 783 aaKnown RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 USP7Q93009 1102 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 ZNF558Q96NG5 402 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 COPS8Q99627 209 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 NTMT1Q9BV86 223 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 ARMC7Q9H6L4 198 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 KAT8Q9H7Z6 458 aaKnown RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 PARVBQ9HBI1 364 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 PLGRKTQ9HBL7 147 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 B4GALT6Q9UBX8 382 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 SLC28A1O00337 649 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 E2F6O75461 281 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 GMNNO75496 209 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 CREG1O75629 220 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 ANXA5P08758 320 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms