RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ASTE1Q2TB18 679 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 FIGNQ5HY92 759 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 ZDHHC20Q5W0Z9 365 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 FCRL6Q6DN72 434 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 RPUSD3Q6P087 351 aaKnown RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 SARM1Q6SZW1 724 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 ISLR2Q6UXK2 745 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 RANBP10Q6VN20 620 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 ARHGEF18Q6ZSZ5 1173 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 PID1Q7Z2X4 250 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 LAPTM4BQ86VI4 370 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 BCORP1Q8N888 145 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 ADAMTS18Q8TE60 1221 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 IL17FQ96PD4 163 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 NDC1Q9BTX1 674 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 CHRNA10Q9GZZ6 450 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 GOLPH3Q9H4A6 298 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 MVB12BQ9H7P6 319 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 HACD3Q9P035 362 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 PTGFRNQ9P2B2 879 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 KLHL8Q9P2G9 620 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 PLCL2Q9UPR0 1127 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 TDRKHQ9Y2W6 561 aaKnown RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 MAU2Q9Y6X3 613 aa9.35□□□□□ -0.91
COL4A5-204ENST00000477429 NSD1Q96L73 2696 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-204ENST00000477429 TRBV5-4A0A0C4DH59 114 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 C17orf113A0A1B0GUU1 675 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 A0A1B0GX78 115 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 CTSVO60911 334 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 GYPCP04921 128 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 CD151P48509 253 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 MARCKSL1P49006 195 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TNFSF10P50591 281 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 YBX1P67809 324 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 KLC1Q07866 573 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 GRB7Q14451 532 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SPARCL1Q14515 664 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 IQCB1Q15051 598 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 C3AR1Q16581 482 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TUBB8Q3ZCM7 444 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 KAZNQ674X7 775 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TLDC1Q6P9B6 456 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 CXXC5Q7LFL8 322 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TAX1BP1Q86VP1 789 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SERPINA9Q86WD7 417 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 VRK3Q8IV63 474 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 MCATQ8IVS2 390 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 ZNF808Q8N4W9 903 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SIRT6Q8N6T7 355 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SLC35G2Q8TBE7 412 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 BRIX1Q8TDN6 353 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TFB1MQ8WVM0 346 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SYN2Q92777 582 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 N4BP2L2Q92802 583 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 FKBP10Q96AY3 582 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 DNAJC1Q96KC8 554 aaKnown RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 COPS8Q99627 209 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 C17orf62Q9BQA9 187 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TMEM121Q9BTD3 319 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 PRM3Q9NNZ6 103 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 CUTCQ9NTM9 273 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 IRAK4Q9NWZ3 460 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 ZDHHC3Q9NYG2 299 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 UVRAGQ9P2Y5 699 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 CRLS1Q9UJA2 301 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
COL4A5-204ENST00000477429 NCOA6Q14686 2063 aaPredicted RBP9.34□□□□□ -0.91
COL4A5-204ENST00000477429 OR51F1A6NGY5 319 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 ISM1B1AKI9 464 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 IFRD1O00458 451 aaPredicted RBP9.33□□□□□ -0.92
COL4A5-204ENST00000477429 CST8O60676 142 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 ACRV1P26436 265 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 MC4RP32245 332 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 MPP3Q13368 585 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 RBBP7Q16576 425 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 DBN1Q16643 649 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 SLC5A12Q1EHB4 618 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 VWA2Q5GFL6 755 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 ATG9BQ674R7 924 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 FRMPD2BQ6IN97 320 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 DCUN1D1Q96GG9 259 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 ZNF285Q96NJ3 590 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 QKIQ96PU8 341 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL4A5-204ENST00000477429 LMF1Q96S06 567 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 MAK16Q9BXY0 300 aaKnown RBP9.33□□□□□ -0.92
COL4A5-204ENST00000477429 EPS8L2Q9H6S3 715 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 WDR54Q9H977 334 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 RSPH14Q9UHP6 348 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 CAPN11Q9UMQ6 739 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 ASF1AQ9Y294 204 aa9.33□□□□□ -0.92
COL4A5-204ENST00000477429 CACNA1CQ13936 2221 aa9.32□□□□□ -0.92
COL4A5-204ENST00000477429 LOC105369274A0A096LPK9 316 aa9.32□□□□□ -0.92
COL4A5-204ENST00000477429 LOC102723532A0A0G2JNH3 316 aa9.32□□□□□ -0.92
COL4A5-204ENST00000477429 SLC5A10A0PJK1 596 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms