RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CST8O60676 142 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IPO13O94829 963 aaKnown RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ZRANB2O95218 330 aaKnown RBP eCLIP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 MT-CYBP00156 380 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ALPPP05187 535 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 EBLN1P0CF75 366 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TNNT1P13805 278 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 BRAFP15056 766 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ITGALP20701 1170 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CYP2A7P20853 494 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 F8A1P23610 371 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PBLDP30039 288 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CCL11P51671 97 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IHHQ14623 411 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PRKD1Q15139 912 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TAF1AQ15573 450 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SLC1A5Q15758 541 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CYP27C1Q4G0S4 372 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SIRPB2Q5JXA9 342 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 FNBP1LQ5T0N5 605 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 GPRC6AQ5T6X5 926 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PWWP2BQ6NUJ5 590 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SARM1Q6SZW1 724 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CLEC18BQ6UXF7 455 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 FAM151BQ6UXP7 276 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 LUZP1Q86V48 1076 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CNGA4Q8IV77 575 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ZNF547Q8IVP9 402 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SLC25A41Q8N5S1 370 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CLEC18CQ8NCF0 446 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ACVR1CQ8NER5 493 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SPATA22Q8NHS9 363 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 HM13Q8TCT9 377 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.06□□□□□ -1.28
BRCA1-214ENST00000477152 EID2BQ96D98 161 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 FER1L6-AS2Q96M78 137 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ALS2CR12Q96Q35 445 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 MAP3K3Q99759 626 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 NLNQ9BYT8 704 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ING2Q9H160 280 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 SRMSQ9H3Y6 488 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 ASB8Q9H765 288 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 KIR3DX1Q9H7L2 352 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 IL26Q9NPH9 171 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 C5AR2Q9P296 337 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 CRLS1Q9UJA2 301 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 PSMD13Q9UNM6 376 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 BTRCQ9Y297 605 aa7.06□□□□□ -1.28
BRCA1-214ENST00000477152 C17orf113A0A1B0GUU1 675 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 SYCE3A1L190 88 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 OR6C74A6NCV1 312 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 C3orf70A6NLC5 250 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-214ENST00000477152 OR2AG2A6NM03 316 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 PEX12O00623 359 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 KIF1CO43896 1103 aaKnown RBP7.05□□□□□ -1.28
BRCA1-214ENST00000477152 FOLR1P15328 257 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 CD151P48509 253 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 VAV2P52735 878 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 BCL7AQ4VC05 210 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 ATP1A1-AS1Q5TC04 95 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 KAZNQ674X7 775 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 DENND5AQ6IQ26 1287 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 C11orf96Q7Z7L8 435 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 TTC30BQ8N4P2 665 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 RASGEF1AQ8N9B8 481 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 IPMKQ8NFU5 416 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 SSC4DQ8WTU2 575 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 LCN9Q8WX39 176 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 LINC00615Q96LM1 132 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-214ENST00000477152 TTC1Q99614 292 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 WWP1Q9H0M0 922 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 MVB12BQ9H7P6 319 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 SLC24A2Q9UI40 661 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 NENFQ9UMX5 172 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 AP1M2Q9Y6Q5 423 aa7.05□□□□□ -1.28
BRCA1-214ENST00000477152 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 GSAPA4D1B5 854 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ARGFXA6NJG6 315 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 C2orf74A8MZ97 194 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 E7EQ34 232 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 H7C0C1 242 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 TMEM63AO94886 807 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 IPO7O95373 1038 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PTMAP06454 111 aaKnown RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 MSL3P1P0C860 447 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PIM1P11309 404 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 IFNGR1P15260 489 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ECI1P42126 302 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 KIR3DL1P43629 444 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 ATP5OP48047 213 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 MLLT10P55197 1068 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 PLOD1Q02809 727 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-214ENST00000477152 RPA4Q13156 261 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 LAMB3Q13751 1172 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 NFE2L1Q14494 772 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 SPA17Q15506 151 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 GPR33Q49SQ1 333 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 IRAK1BP1Q5VVH5 260 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 KDELC1Q6UW63 502 aa7.04□□□□□ -1.28
BRCA1-214ENST00000477152 NPNTQ6UXI9 565 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms