RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TBC1D21Q8IYX1 336 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 LMNTD1Q8N9Z9 388 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 C19orf60Q96EN9 201 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 IL17FQ96PD4 163 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 FERD3LQ96RJ6 166 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 MIR1-1HGQ9H1L0 117 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 TCEAL2Q9H3H9 227 aaPredicted RBP28■■■□□ 2.07
VEGFA-211ENST00000476772 PRMT8Q9NR22 394 aaPredicted RBP28■■■□□ 2.07
VEGFA-211ENST00000476772 BTRCQ9Y297 605 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 A0A1W2PR77 199 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 OR52A4PA6NMU1 304 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 E9PBE3 544 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 PIP5K1BO14986 540 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 KLHL41O60662 606 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 CD38P28907 300 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 ACTR1BP42025 376 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 FNTBP49356 437 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 ACTR1AP61163 376 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 ZNF542PQ5EBM4 170 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 TCHHL1Q5QJ38 904 aaPredicted RBP28■■■□□ 2.07
VEGFA-211ENST00000476772 SLC30A9Q6PML9 568 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 MFSD2AQ8NA29 543 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 CCDC28BQ9BUN5 200 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 SCHIP1Q9P0W5 487 aaPredicted RBP28■■■□□ 2.07
VEGFA-211ENST00000476772 KLF15Q9UIH9 416 aa28■■■□□ 2.07
VEGFA-211ENST00000476772 CACNA1IQ9P0X4 2223 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 ABCA7Q8IZY2 2146 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 SERPINA6P08185 405 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 EBLN1P0CF75 366 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 PNLIPRP1P54315 467 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 TBPL1P62380 186 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 TJAP1Q5JTD0 557 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 NXNQ6DKJ4 435 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 METTL6Q8TCB7 284 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 C3orf30Q96M34 536 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 OR4K3Q96R72 315 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 RNF11Q9Y3C5 154 aa27.99■■■□□ 2.07
VEGFA-211ENST00000476772 CCDC163A0A0D9SF12 145 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 CCDC22O60826 627 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 EML2O95834 649 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 ENO1P06733 434 aaKnown RBP27.98■■■□□ 2.07
VEGFA-211ENST00000476772 HGFP14210 728 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 RACK1P63244 317 aaKnown RBP27.98■■■□□ 2.07
VEGFA-211ENST00000476772 CDC16Q13042 620 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 FASTKQ14296 549 aaKnown RBP27.98■■■□□ 2.07
VEGFA-211ENST00000476772 RPE65Q16518 533 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 EFL1Q7Z2Z2 1120 aaKnown RBP27.98■■■□□ 2.07
VEGFA-211ENST00000476772 NRROSQ86YC3 692 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 DDIASQ8IXT1 998 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 LRRC56Q8IYG6 542 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-211ENST00000476772 ACTR8Q9H981 624 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 TM9SF3Q9HD45 589 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 TRPS1Q9UHF7 1281 aa27.98■■■□□ 2.07
VEGFA-211ENST00000476772 E7ENX8 843 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 KIAA0754O94854 1291 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 CHEK2O96017 543 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 TDGF1P13385 188 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 TAP2Q03519 686 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 SPRED3Q2MJR0 410 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 PARGQ86W56 976 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 NRTNQ99748 197 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 ARMCX1Q9P291 453 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 CLDN9O95484 217 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 HMOX2P30519 316 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 HALP42357 657 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 TSTA3Q13630 321 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 GALNTL6Q49A17 601 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 SPDYAQ5MJ70 313 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 CAPN13Q6MZZ7 669 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 ABRAXAS1Q6UWZ7 409 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 WASH2PQ6VEQ5 465 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 ARMCX6Q7L4S7 300 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 YTHDF3Q7Z739 585 aaKnown RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 MYLK4Q86YV6 388 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 DCP2Q8IU60 420 aaKnown RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 GBP7Q8N8V2 638 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-211ENST00000476772 ACTRT2Q8TDY3 377 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 MENTQ9BUN1 341 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 WASH6PQ9NQA3 447 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 FANCMQ8IYD8 2048 aa27.97■■■□□ 2.07
VEGFA-211ENST00000476772 ATP6AP2A0A1C7CYW4 349 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 TMEM221A6NGB7 291 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 M0R296 226 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 LAMTOR5O43504 91 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 PRAMEF4O60810 478 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 ATP6AP2O75787 350 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 LINC00032P0C843 101 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 ERGP11308 486 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 MTHFD1P11586 935 aaKnown RBP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 NCF2P19878 526 aaPredicted RBP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 HTR6P50406 440 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 HNRNPH2P55795 449 aaKnown RBP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 ILF3Q12906 894 aaKnown RBP eCLIP27.96■■■□□ 2.07
VEGFA-211ENST00000476772 PRAMEF9Q5VWM5 478 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 SCIMPQ6UWF3 145 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 IQCHQ86VS3 1027 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 PHACTR4Q8IZ21 702 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 CEP70Q8NHQ1 597 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 C1orf216Q8TAB5 229 aa27.96■■■□□ 2.07
VEGFA-211ENST00000476772 SGPP1Q9BX95 441 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms