RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
USP54-211ENST00000474929 CUTCQ9NTM9 273 aa7.64□□□□□ -1.19
USP54-211ENST00000474929 SPTLC3Q9NUV7 552 aa7.64□□□□□ -1.19
USP54-211ENST00000474929 AMACRQ9UHK6 382 aa7.64□□□□□ -1.19
USP54-211ENST00000474929 KLF13Q9Y2Y9 288 aaPredicted RBP7.64□□□□□ -1.19
USP54-211ENST00000474929 LOC102723996A0A087X1L8 192 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 A8MV72 311 aaPredicted RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 IFRD1O00458 451 aaPredicted RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 PSMA7O14818 248 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 WDR1O75083 606 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 MTX2O75431 263 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 SLC25A12O75746 678 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 POP7O75817 140 aaKnown RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 GNA14O95837 355 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 SHMT2P34897 504 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 SERPINB6P35237 376 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 EMP2P54851 167 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 MAXP61244 160 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 EEF1A2Q05639 463 aaKnown RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 KRTAP1-1Q07627 177 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 NFE2L1Q14494 772 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 PTPRRQ15256 657 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 LONRF2Q1L5Z9 754 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 ZC3H12BQ5HYM0 836 aaKnown RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 LDLRAP1Q5SW96 308 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 RIPPLY2Q5TAB7 128 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 LIPNQ5VXI9 398 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 ACAD10Q6JQN1 1059 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 C20orf204Q6ZNR8 217 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 RFX8Q6ZV50 586 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 PGBD5Q8N414 524 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 LIX1Q8N485 282 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 MEIOBQ8N635 442 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 ATG10Q9H0Y0 220 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 RBSNQ9H1K0 784 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 PCDH9Q9HC56 1237 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 ZNF304Q9HCX3 659 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 FAM60AQ9NP50 221 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 RTN4Q9NQC3 1192 aaKnown RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 ENAMQ9NRM1 1142 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 EURLQ9NYK6 297 aa7.63□□□□□ -1.19
USP54-211ENST00000474929 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP54-211ENST00000474929 C19orf25Q9UFG5 118 aaPredicted RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 EIF3LQ9Y262 564 aaKnown RBP7.63□□□□□ -1.19
USP54-211ENST00000474929 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP54-211ENST00000474929 IGLV3-12A0A075B6K2 115 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 MGAT4DA6NG13 374 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 HSPB2A8KAH6 182 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 KLRC4-KLRK1H3BQV0 150 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 BTN3A3O00478 584 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 MT-CYBP00156 380 aaPredicted RBP7.62□□□□□ -1.19
USP54-211ENST00000474929 HRGP04196 525 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 CYP1A1P04798 512 aaPredicted RBP7.62□□□□□ -1.19
USP54-211ENST00000474929 KRT3P12035 628 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ERCC2P18074 760 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 SYT1P21579 422 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 SOX5P35711 763 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 CD86P42081 329 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 GSCP56915 257 aaPredicted RBP7.62□□□□□ -1.19
USP54-211ENST00000474929 TAS2R50P59544 299 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ITKQ08881 620 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 DPYSQ14117 519 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 HSPB2Q16082 182 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ETFDHQ16134 617 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 MAPKAPK3Q16644 382 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 RAB6CQ53S08 254 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 PLAG1Q6DJT9 500 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ALG1LQ6GMV1 187 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 H3F3CQ6NXT2 135 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ZNF449Q6P9G9 518 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 C12orf54Q6X4T0 127 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 ARHGAP36Q6ZRI8 547 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 LRRC49Q8IUZ0 686 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 OR2L2Q8NH16 312 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 DTX3LQ8TDB6 740 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 SELENOOQ9BVL4 669 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 RAB6CQ9H0N0 254 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 MVB12BQ9H7P6 319 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 YAE1D1Q9NRH1 226 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 INTS7Q9NVH2 962 aaKnown RBP7.62□□□□□ -1.19
USP54-211ENST00000474929 TMEM160Q9NX00 188 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 CDC14AQ9UNH5 594 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 AP4E1Q9UPM8 1137 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 CHKBQ9Y259 395 aa7.62□□□□□ -1.19
USP54-211ENST00000474929 A0A0G2JNJ9 132 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 MBD3L4A6NDZ8 208 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 MBD3L5A6NJ08 208 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 GABRR3A8MPY1 467 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 A8MUI8 341 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 ANKRD66B4E2M5 251 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 ACOT7O00154 380 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 PRPSAP2O60256 369 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 PGRP06401 933 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 HEXBP07686 556 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 GABRA1P14867 456 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 PFKFB1P16118 471 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 UGT2B7P16662 529 aa7.61□□□□□ -1.19
USP54-211ENST00000474929 FBLP22087 321 aaKnown RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 PBLDP30039 288 aaPredicted RBP7.61□□□□□ -1.19
USP54-211ENST00000474929 CD96P40200 585 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms