RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 H0Y626 953 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 PSMD11O00231 422 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 TRIM16O95361 564 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 PRAMEF12O95522 483 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 IL6P05231 212 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 RETP07949 1114 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 S100A1P23297 94 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 SLC6A4P31645 630 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 KRT20P35900 424 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 NRIP1P48552 1158 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 FCGRTP55899 365 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 CPSF6Q16630 551 aaKnown RBP eCLIP15.95■□□□□ 0.143e-6■■□□□ 12.6
TPR-205ENST00000474852 PTRHD1Q6GMV3 140 aaKnown RBP15.95■□□□□ 0.14
TPR-205ENST00000474852 VTCN1Q7Z7D3 282 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 ARMC8Q8IUR7 673 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 TTC29Q8NA56 475 aaPredicted RBP15.95■□□□□ 0.14
TPR-205ENST00000474852 PSKH2Q96QS6 385 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 BOCQ9BWV1 1114 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 PDP1Q9P0J1 537 aaPredicted RBP15.95■□□□□ 0.14
TPR-205ENST00000474852 KIF17Q9P2E2 1029 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 RIMKLBQ9ULI2 386 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 VPS9D1Q9Y2B5 631 aa15.95■□□□□ 0.14
TPR-205ENST00000474852 TNPO3Q9Y5L0 923 aaKnown RBP15.95■□□□□ 0.14
TPR-205ENST00000474852 ZFP37Q9Y6Q3 630 aaPredicted RBP15.95■□□□□ 0.14
TPR-205ENST00000474852 GOLGA8CPA6NN73 597 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ANKRD66B4E2M5 251 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 RECQL5O94762 991 aaPredicted RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 BMP1P13497 986 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 CTPS1P17812 591 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 NR4A2P43354 598 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 HUNKP57058 714 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 RFX4Q33E94 735 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 SYT6Q5T7P8 510 aaPredicted RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 ARMCX6Q7L4S7 300 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ADAMTSL2Q86TH1 951 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 CLIP4Q8N3C7 705 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 LKAAEAR1Q8TD35 194 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 PHF10Q8WUB8 498 aaKnown RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 ZNF566Q969W8 418 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ULK4Q96C45 1275 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 DCSTAMPQ9H295 470 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 CLMPQ9H6B4 373 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 TMEM45AQ9NWC5 275 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 AGO1Q9UL18 857 aaKnown RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 DLGAP4Q9Y2H0 992 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 LOC730098B7Z3J9 87 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 RAD51BO15315 384 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 DBTP11182 482 aaKnown RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 BCKDHAP12694 445 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ACVR2AP27037 513 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 GTF2E2P29084 291 aaKnown RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 IL18R1Q13478 541 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 GNASQ5JWF2 1037 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 LDLRAD1Q5T700 205 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ATAD3BQ5T9A4 648 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 SHQ1Q6PI26 577 aaKnown RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 ATG16L2Q8NAA4 619 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 PSD4Q8NDX1 1056 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 RHOXF1Q8NHV9 184 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 ELMO1Q92556 727 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 DHRS1Q96LJ7 313 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 SEPT5Q99719 369 aaPredicted RBP15.94■□□□□ 0.14
TPR-205ENST00000474852 RMND5AQ9H871 391 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 OPTCQ9UBM4 332 aa15.94■□□□□ 0.14
TPR-205ENST00000474852 M0QX08 132 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 PGLSO95336 258 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 ITGAMP11215 1152 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 EIF2DP41214 584 aaKnown RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 MAPKAPK2P49137 400 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 ARHGDIAP52565 204 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 PPP5CP53041 499 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 DOK6Q6PKX4 331 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 FAM151BQ6UXP7 276 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 Q6ZPB1 254 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 ZNF551Q7Z340 670 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 RASAL3Q86YV0 1011 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 FAM83FQ8NEG4 500 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 PARVBQ9HBI1 364 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 SCAMP3O14828 347 aaKnown RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 ESR1P03372 595 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 TACR1P25103 407 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 CA5AP35218 305 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 OR1G1P47890 313 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 NEK2P51955 445 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 STEAP3Q658P3 488 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 OR2T5Q6IEZ7 315 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 MRPL10Q7Z7H8 261 aaKnown RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 ZNF598Q86UK7 904 aaKnown RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 LYSMD2Q8IV50 215 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 OR2T29Q8NH02 315 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 FBLIM1Q8WUP2 373 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 CAPSLQ8WWF8 208 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 CPPED1Q9BRF8 314 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 NACA2Q9H009 215 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 GPRC5BQ9NZH0 403 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 CAB39Q9Y376 341 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 DHRS7Q9Y394 339 aa15.93■□□□□ 0.14
TPR-205ENST00000474852 ARIH1Q9Y4X5 557 aaPredicted RBP15.93■□□□□ 0.14
TPR-205ENST00000474852 UPK3BL1B0FP48 263 aa15.92■□□□□ 0.14
TPR-205ENST00000474852 UPK3BL2E5RIL1 263 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms