RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CFAP61Q8NHU2 1237 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 FLVCR1-AS1Q8TAF5 88 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 GABPB2Q8TAK5 448 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 FAM45AQ8TCE6 357 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 EPS8L3Q8TE67 593 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 UBLCP1Q8WVY7 318 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ZFPM2Q8WW38 1151 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PTERQ96BW5 349 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 CXorf40BQ96DE9 158 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 LINGO1Q96FE5 620 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PPM1MQ96MI6 270 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 GPR78Q96P69 363 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 IL17FQ96PD4 163 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 FERD3LQ96RJ6 166 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 HGH1Q9BTY7 390 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 TSSK1BQ9BXA7 367 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 UNKQ9C0B0 810 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 CCDC68Q9H2F9 335 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 LRRN3Q9H3W5 708 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 TFB2MQ9H5Q4 396 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 XKR8Q9H6D3 395 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 MVB12BQ9H7P6 319 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RDH14Q9HBH5 336 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SNX15Q9NRS6 342 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SPHK1Q9NYA1 384 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PDP2Q9P2J9 529 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 FETUBQ9UGM5 382 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PDE10AQ9Y233 779 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ASF1AQ9Y294 204 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SDK2Q58EX2 2172 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 A0A1W2PPV9 198 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TRIM49D1C9J1S8 452 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 D6RAR5 112 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 F8W8V4 182 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MYO1CO00159 1063 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 EIF3FO00303 357 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ZBTB14O43829 449 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 KIF1CO43896 1103 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 C2P06681 752 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MPC1LP0DKB6 136 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CBSLP0DN79 551 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ERGP11308 486 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ENO3P13929 434 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TYRP1P17643 537 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MPSTP25325 297 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CBSP35520 551 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MSH2P43246 934 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 SLCO1A2P46721 670 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CAPZBP47756 277 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 EPHA4P54764 986 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 GFERP55789 205 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 IL2P60568 153 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 RAB10P61026 200 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 YBX1P67809 324 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ZFP36L1Q07352 338 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 PDAP1Q13442 181 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 OR4D1Q15615 310 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 PPP1R3AQ16821 1122 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TTLL9Q3SXZ7 439 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 AMZ1Q400G9 498 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 BROXQ5VW32 411 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MBOAT1Q6ZNC8 495 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TIFABQ6ZNK6 161 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CLEC14AQ86T13 490 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TDRPQ86YL5 185 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 DCUN1D3Q8IWE4 304 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TRIM48Q8IWZ4 208 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 LRRC56Q8IYG6 542 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TMEM151AQ8N4L1 468 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 OR4E2Q8NGC2 313 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 OR6C4Q8NGE1 309 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ZBTB9Q96C00 473 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 PKP4Q99569 1192 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 SLC12A9Q9BXP2 914 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 NRSN2Q9GZP1 204 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ABCG4Q9H172 646 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TRIT1Q9H3H1 467 aaKnown RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 SEMA6CQ9H3T2 930 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 POPDC3Q9HBV1 291 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 GPAMQ9HCL2 828 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 EVA1BQ9NVM1 165 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF358Q9NW07 568 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 TXNDC16Q9P2K2 825 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 HEBP2Q9Y5Z4 205 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 USP9YO00507 2555 aaPredicted RBP6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC88CQ9P219 2028 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 CNTRLQ7Z7A1 2325 aa6.77□□□□□ -1.33
LIMD1-204ENST00000474665 MN1Q10571 1320 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 LRRK2Q5S007 2527 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 A0A096LPK6 155 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms