RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PITRM1Q5JRX3 1037 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 Q5PR19 223 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 MFSD14CQ5VZR4 134 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 CYP4Z1Q86W10 505 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 GID4Q8IVV7 300 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 GUF1Q8N442 669 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 C1orf127Q8N9H9 656 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 MLKLQ8NB16 471 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 RP9Q8TA86 221 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 PCDH19Q8TAB3 1148 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 NETO1Q8TDF5 533 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 RNFT2Q96EX2 444 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 FBXL20Q96IG2 436 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 RBM15Q96T37 977 aaKnown RBP eCLIP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 TINAGL1Q9GZM7 467 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 KAT14Q9H8E8 782 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 CHODLQ9H9P2 273 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 UFSP2Q9NUQ7 469 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 RIC8BQ9NVN3 520 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 FAM118AQ9NWS6 357 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 CLEC5AQ9NY25 188 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 PDP1Q9P0J1 537 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 CTNNAL1Q9UBT7 734 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 ZNF70Q9UC06 446 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 TJP2Q9UDY2 1190 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 TRMT6Q9UJA5 497 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 HAO1Q9UJM8 370 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 FAF1Q9UNN5 650 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 NSFL1CQ9UNZ2 370 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 SHOC2Q9UQ13 582 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 PADI2Q9Y2J8 665 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 YBX2Q9Y2T7 364 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 VWA7Q9Y334 891 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 PTRH2Q9Y3E5 179 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 GMPPBQ9Y5P6 360 aa5.95□□□□□ -1.46
SMARCE1-208ENST00000474246 PRRC2BQ5JSZ5 2229 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SLC35F4A4IF30 521 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 TCP11X1B4DZS4 312 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 KCNJ18B7U540 433 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 WFS1O76024 890 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CALB1P05937 261 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 THBS1P07996 1170 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SNRPB2P08579 225 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 GSTP1P09211 210 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 ICAM2P13598 275 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 DDCP20711 480 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 AGAP20933 346 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CMA1P23946 247 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 GNA11P29992 359 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 RYKP34925 604 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SOAT1P35610 550 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 RAP1GAPP47736 663 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 NRG3P56975 720 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CSNK1G2P78368 415 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CACNG1Q06432 222 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 PTP4A2Q12974 167 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SNTA1Q13424 505 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 PEX6Q13608 980 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 FLOT2Q14254 428 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 KCNJ12Q14500 433 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 HIF1AQ16665 826 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 PHYHD1Q5SRE7 291 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 KLHL35Q6PF15 583 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 ARSKQ6UWY0 536 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CHST9Q7L1S5 443 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 KCNK18Q7Z418 384 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 LHFPL3Q86UP9 236 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 PPP1R3BQ86XI6 285 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 NRROSQ86YC3 692 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 ZDHHC21Q8IVQ6 265 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 ZC3H7AQ8IWR0 971 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 LRRC8AQ8IWT6 810 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 BBS7Q8IWZ6 715 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SELENOHQ8IZQ5 122 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 FAM185AQ8N0U4 392 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CLYBLQ8N0X4 340 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 NAGSQ8N159 534 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SH2D3CQ8N5H7 860 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 OR7G3Q8NG95 312 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 DTX3LQ8TDB6 740 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 KCTD4Q8WVF5 259 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SELENOMQ8WWX9 145 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 MRGPRFQ96AM1 343 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 HAVCR1Q96D42 359 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 ERLEC1Q96DZ1 483 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 PRRC1Q96M27 445 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 BBC3Q96PG8 261 aaPredicted RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 TAAR1Q96RJ0 339 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 BCL2L14Q9BZR8 327 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 MIS12Q9H081 205 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SMG9Q9H0W8 520 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 OPN3Q9H1Y3 402 aaPredicted RBP5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 CRISPLD1Q9H336 500 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 AUNIPQ9H7T9 357 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 FAM105AQ9NUU6 356 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 SETD4Q9NVD3 440 aa5.94□□□□□ -1.46
SMARCE1-208ENST00000474246 LRIT1Q9P2V4 623 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms