RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 MAGEC3Q8TD91 643 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 ZNF514Q96K75 400 aaPredicted RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 C1QTNF2Q9BXJ5 285 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 SLC29A3Q9BZD2 475 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TRIM8Q9BZR9 551 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 ZDHHC5Q9C0B5 715 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 OR52A5Q9H2C5 316 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 DCLRE1BQ9H816 532 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 PFDN4Q9NQP4 134 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 PLAGL1Q9UM63 463 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 CFAP20Q9Y6A4 193 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3DA0A087WVF3 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3IA0A087WXS9 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3EA0A087X179 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3KA0A087X1G2 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 C17orf113A0A1B0GUU1 675 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3FA6NER0 549 aaPredicted RBP17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3LB9A6J9 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 SCAMP1O15126 338 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3HP0C7X1 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 IGFALSP35858 605 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 RPS21P63220 83 aaKnown RBP17.49■□□□□ 0.39
VARS2-206ENST00000473916 EMX2Q04743 252 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 AGERQ15109 404 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3GQ6DHY5 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3CQ6IPX1 549 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 CYP20A1Q6UW02 462 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 TBC1D3Q8IZP1 549 aaPredicted RBP17.49■□□□□ 0.39
VARS2-206ENST00000473916 L3MBTL4Q8NA19 623 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 ZNF480Q8WV37 535 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 STMN2Q93045 179 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 SLC17A9Q9BYT1 436 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 ADA2Q9NZK5 511 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 PCM1Q15154 2024 aa17.49■□□□□ 0.39
VARS2-206ENST00000473916 CLGNO14967 610 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SLC22A3O75751 556 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 DRD1P21728 446 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 TRIM23P36406 574 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 MS4A2Q01362 244 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SGCGQ13326 291 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 RCAN2Q14206 197 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 CAPRIN1Q14444 709 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 PTGR1Q14914 329 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 PDCD4Q53EL6 469 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 C6orf163Q5TEZ5 329 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 C8orf82Q6P1X6 216 aaPredicted RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 TTC23LQ6PF05 361 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 LRRTM4Q86VH4 590 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 AMZ2Q86W34 360 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 OR5AR1Q8NGP9 310 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SELENOMQ8WWX9 145 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 PYDC1Q8WXC3 89 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SIPA1Q96FS4 1042 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 MRGPRX1Q96LB2 322 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 TACO1Q9BSH4 297 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 TRPV5Q9NQA5 729 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 CROCCQ5TZA2 2017 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 FXYD1O00168 92 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 ANKRD28O15084 1053 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SLC31A1O15431 190 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 RGS14O43566 566 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 GNAZP19086 355 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 NDUFV2P19404 249 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 RPL10P27635 214 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 CCDC6Q16204 474 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 IMPG1Q17R60 797 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 GGTA1PQ4G0N0 100 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 TIGD2Q4W5G0 525 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 KIAA1324Q6UXG2 1013 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 OR56A3Q8NH54 315 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 IL17FQ96PD4 163 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 ELOVL6Q9H5J4 265 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 MRPL40Q9NQ50 206 aaKnown RBP17.48■□□□□ 0.39
VARS2-206ENST00000473916 CA5BQ9Y2D0 317 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 PLEKHM1Q9Y4G2 1056 aa17.48■□□□□ 0.39
VARS2-206ENST00000473916 SLC28A1O00337 649 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 ANGPT2O15123 496 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 KRT6AP02538 564 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 KRT6BP04259 564 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 VARSP26640 1264 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 KRT6CP48668 564 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 MRPL19P49406 292 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 POLR2JP52435 117 aaKnown RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 TBPL1P62380 186 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 IRF8Q02556 426 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 DOC2AQ14183 400 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 XKR6Q5GH73 641 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 PAGE3Q5JUK9 113 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 SUSD1Q6UWL2 747 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 C2orf73Q8N5S3 287 aaPredicted RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 PPP3R2Q96LZ3 170 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 DPEP2Q9H4A9 486 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 C8orf33Q9H7E9 229 aaPredicted RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
VARS2-206ENST00000473916 LRTM1Q9HBL6 345 aa17.47■□□□□ 0.39
VARS2-206ENST00000473916 NDE1Q9NXR1 346 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms