RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TAX1BP1Q86VP1 789 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 CCDC110Q8TBZ0 833 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 KRT35Q92764 455 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAF4-209ENST00000473421 ULK4Q96C45 1275 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 VAT1Q99536 393 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TRIM56Q9BRZ2 755 aaKnown RBP12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TRIM8Q9BZR9 551 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 TRHDEQ9UKU6 1024 aa12.09□□□□□ -0.47
TRAF4-209ENST00000473421 A0A1B0GUH1 482 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 A0A1B0GX78 115 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SLC5A10A0PJK1 596 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 VSTM2BA6NLU5 285 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 H7C0C1 242 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 FFAR3O14843 346 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 GPR42O15529 346 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SPOPO43791 374 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ATP5OP48047 213 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 YBX1P67809 324 aaKnown RBP12.08□□□□□ -0.48
TRAF4-209ENST00000473421 MFAP5Q13361 173 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ART3Q13508 389 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ANKRD20A2Q5SQ80 823 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ANKRD20A1Q5TYW2 823 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ANKRD20A3Q5VUR7 823 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 B3GNTL1Q67FW5 361 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-209ENST00000473421 CAVIN1Q6NZI2 390 aaKnown RBP12.08□□□□□ -0.48
TRAF4-209ENST00000473421 FAM180AQ6UWF9 173 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ISLR2Q6UXK2 745 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 MAGEB10Q96LZ2 347 aaPredicted RBP12.08□□□□□ -0.48
TRAF4-209ENST00000473421 DNAJC7Q99615 494 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SLC26A1Q9H2B4 701 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SYNPO2LQ9H987 977 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ZNF160Q9HCG1 818 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 CUTCQ9NTM9 273 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SMARCAL1Q9NZC9 954 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 OR6C2Q9NZP2 312 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 IMPACTQ9P2X3 320 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 SH3BGRL2Q9UJC5 107 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 ALG6Q9Y672 507 aa12.08□□□□□ -0.48
TRAF4-209ENST00000473421 TRGV8A0A0C4DH27 118 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 DSCR3O14972 297 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 AKR1B10O60218 316 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 OR1I1O60431 355 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 KLHL41O60662 606 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 CTSVO60911 334 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 ANXA9O76027 345 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 CRTAMO95727 393 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 HTR1EP28566 365 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 PKLRP30613 574 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 ST13P50502 369 aaKnown RBP12.07□□□□□ -0.48
TRAF4-209ENST00000473421 EFNA3P52797 238 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 RBBP7Q16576 425 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 SLC5A12Q1EHB4 618 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 TUBB8Q3ZCM7 444 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 GPR33Q49SQ1 333 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 ODF2Q5BJF6 829 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 AADACL2Q6P093 401 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 NCCRP1Q6ZVX7 275 aaPredicted RBP12.07□□□□□ -0.48
TRAF4-209ENST00000473421 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 BZW1Q7L1Q6 419 aaKnown RBP12.07□□□□□ -0.48
TRAF4-209ENST00000473421 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 TBC1D21Q8IYX1 336 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 BCORP1Q8N888 145 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 OR5K2Q8NHB8 316 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 LKAAEAR1Q8TD35 194 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 ELMO1Q92556 727 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 NR4A3Q92570 626 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 FKBP10Q96AY3 582 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 CDKN2AIPNLQ96HQ2 116 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 GBP4Q96PP9 640 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 TBL1YQ9BQ87 522 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 WDR54Q9H977 334 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 PTGFRNQ9P2B2 879 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
TRAF4-209ENST00000473421 MTORP42345 2549 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 LOC105369274A0A096LPK9 316 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 LOC102723532A0A0G2JNH3 316 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 HACD1B0YJ81 288 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 CCL21O00585 134 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ZNHIT1O43257 154 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 UNC5CO95185 931 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 MBD3O95983 291 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ALBP02768 609 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 CD63P08962 238 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 PSMB5P28074 263 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 SOX11P35716 441 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 SLC1A1P43005 524 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 TNFSF10P50591 281 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 SNRPNP63162 240 aaKnown RBP12.06□□□□□ -0.48
TRAF4-209ENST00000473421 ADORA2A-AS1P86434 159 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 PMP22Q01453 160 aa12.06□□□□□ -0.48
TRAF4-209ENST00000473421 KLC1Q07866 573 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms