RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 GPLD1P80108 840 aa8.83□□□□□ -1
SMC4-214ENST00000472991 ILF2Q12905 390 aaKnown RBP8.83□□□□□ -1
SMC4-214ENST00000472991 BMPR2Q13873 1038 aa8.83□□□□□ -1
SMC4-214ENST00000472991 SLC29A2Q14542 456 aa8.83□□□□□ -1
SMC4-214ENST00000472991 PAQR3Q6TCH7 311 aa8.83□□□□□ -1
SMC4-214ENST00000472991 UNC5DQ6UXZ4 953 aa8.83□□□□□ -1
SMC4-214ENST00000472991 RBM44Q6ZP01 1051 aaKnown RBP8.83□□□□□ -1
SMC4-214ENST00000472991 NEK10Q6ZWH5 1172 aa8.83□□□□□ -1
SMC4-214ENST00000472991 USP53Q70EK8 1073 aa8.83□□□□□ -1
SMC4-214ENST00000472991 PIWIL4Q7Z3Z4 852 aaKnown RBP8.83□□□□□ -1
SMC4-214ENST00000472991 TMPRSS9Q7Z410 1059 aa8.83□□□□□ -1
SMC4-214ENST00000472991 RAB44Q7Z6P3 723 aaPredicted RBP8.83□□□□□ -1
SMC4-214ENST00000472991 DCUN1D3Q8IWE4 304 aa8.83□□□□□ -1
SMC4-214ENST00000472991 ALDH16A1Q8IZ83 802 aa8.83□□□□□ -1
SMC4-214ENST00000472991 OR52E1Q8NGJ3 308 aa8.83□□□□□ -1
SMC4-214ENST00000472991 OR5K2Q8NHB8 316 aa8.83□□□□□ -1
SMC4-214ENST00000472991 WDR48Q8TAF3 677 aa8.83□□□□□ -1
SMC4-214ENST00000472991 AENQ8WTP8 325 aaKnown RBP8.83□□□□□ -1
SMC4-214ENST00000472991 UBLCP1Q8WVY7 318 aaPredicted RBP8.83□□□□□ -1
SMC4-214ENST00000472991 RSC1A1Q92681 617 aa8.83□□□□□ -1
SMC4-214ENST00000472991 LINGO1Q96FE5 620 aa8.83□□□□□ -1
SMC4-214ENST00000472991 FOPNLQ96NB1 174 aa8.83□□□□□ -1
SMC4-214ENST00000472991 PAFAH2Q99487 392 aa8.83□□□□□ -1
SMC4-214ENST00000472991 NRTNQ99748 197 aa8.83□□□□□ -1
SMC4-214ENST00000472991 NUDT22Q9BRQ3 303 aa8.83□□□□□ -1
SMC4-214ENST00000472991 PARD6BQ9BYG5 372 aa8.83□□□□□ -1
SMC4-214ENST00000472991 OGFRQ9NZT2 677 aa8.83□□□□□ -1
SMC4-214ENST00000472991 KLHL42Q9P2K6 505 aa8.83□□□□□ -1
SMC4-214ENST00000472991 SLC39A10Q9ULF5 831 aa8.83□□□□□ -1
SMC4-214ENST00000472991 PLAGL1Q9UM63 463 aa8.83□□□□□ -1
SMC4-214ENST00000472991 AKAP13Q12802 2813 aa8.82□□□□□ -1
SMC4-214ENST00000472991 FAM149AA5PLN7 773 aa8.82□□□□□ -1
SMC4-214ENST00000472991 KRT87PA6NCN2 255 aa8.82□□□□□ -1
SMC4-214ENST00000472991 ARHGEF33A8MVX0 844 aa8.82□□□□□ -1
SMC4-214ENST00000472991 EIF3FO00303 357 aaPredicted RBP8.82□□□□□ -1
SMC4-214ENST00000472991 PHGDHO43175 533 aaKnown RBP8.82□□□□□ -1
SMC4-214ENST00000472991 CSO75390 466 aaKnown RBP8.82□□□□□ -1
SMC4-214ENST00000472991 TCEA3O75764 348 aa8.82□□□□□ -1
SMC4-214ENST00000472991 UBXN7O94888 489 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MATN4O95460 622 aa8.82□□□□□ -1
SMC4-214ENST00000472991 C1orf105O95561 183 aa8.82□□□□□ -1
SMC4-214ENST00000472991 TSPAN12O95859 305 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MT-CO3P00414 261 aa8.82□□□□□ -1
SMC4-214ENST00000472991 RPN2P04844 631 aa8.82□□□□□ -1
SMC4-214ENST00000472991 FURINP09958 794 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CBSLP0DN79 551 aa8.82□□□□□ -1
SMC4-214ENST00000472991 AMD1P17707 334 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CBSP35520 551 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MSH2P43246 934 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CAPZBP47756 277 aa8.82□□□□□ -1
SMC4-214ENST00000472991 PDX1P52945 283 aa8.82□□□□□ -1
SMC4-214ENST00000472991 GFERP55789 205 aa8.82□□□□□ -1
SMC4-214ENST00000472991 POU4F1Q01851 419 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CFHR1Q03591 330 aa8.82□□□□□ -1
SMC4-214ENST00000472991 USP10Q14694 798 aaKnown RBP8.82□□□□□ -1
SMC4-214ENST00000472991 CCSMST1Q4G0I0 132 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CDCP2Q5VXM1 449 aa8.82□□□□□ -1
SMC4-214ENST00000472991 LRRC8EQ6NSJ5 796 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CYHR1Q6ZMK1 362 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CMC1Q7Z7K0 106 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MARCH9Q86YJ5 346 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CEP97Q8IW35 865 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MYO1HQ8N1T3 1032 aa8.82□□□□□ -1
SMC4-214ENST00000472991 GALNT15Q8N3T1 639 aa8.82□□□□□ -1
SMC4-214ENST00000472991 OR4E2Q8NGC2 313 aa8.82□□□□□ -1
SMC4-214ENST00000472991 EEF1AKMT1Q8WVE0 214 aa8.82□□□□□ -1
SMC4-214ENST00000472991 ZFPM2Q8WW38 1151 aa8.82□□□□□ -1
SMC4-214ENST00000472991 SLC44A1Q8WWI5 657 aa8.82□□□□□ -1
SMC4-214ENST00000472991 LCN9Q8WX39 176 aa8.82□□□□□ -1
SMC4-214ENST00000472991 NCSTNQ92542 709 aa8.82□□□□□ -1
SMC4-214ENST00000472991 TSPAN17Q96FV3 270 aa8.82□□□□□ -1
SMC4-214ENST00000472991 DEPDC7Q96QD5 511 aa8.82□□□□□ -1
SMC4-214ENST00000472991 EPB41L1Q9H4G0 881 aa8.82□□□□□ -1
SMC4-214ENST00000472991 XKR8Q9H6D3 395 aa8.82□□□□□ -1
SMC4-214ENST00000472991 TMEM9Q9P0T7 183 aa8.82□□□□□ -1
SMC4-214ENST00000472991 POLG2Q9UHN1 485 aa8.82□□□□□ -1
SMC4-214ENST00000472991 ICKQ9UPZ9 632 aa8.82□□□□□ -1
SMC4-214ENST00000472991 CLCA2Q9UQC9 943 aa8.82□□□□□ -1
SMC4-214ENST00000472991 IKBKGQ9Y6K9 419 aa8.82□□□□□ -1
SMC4-214ENST00000472991 MN1Q10571 1320 aaPredicted RBP8.81□□□□□ -1
SMC4-214ENST00000472991 MED19A0JLT2 244 aaPredicted RBP8.81□□□□□ -1
SMC4-214ENST00000472991 OR6C74A6NCV1 312 aa8.81□□□□□ -1
SMC4-214ENST00000472991 OR5K3A6NET4 321 aa8.81□□□□□ -1
SMC4-214ENST00000472991 BTN3A1O00481 513 aa8.81□□□□□ -1
SMC4-214ENST00000472991 PSIP1O75475 530 aaKnown RBP8.81□□□□□ -1
SMC4-214ENST00000472991 WISP3O95389 354 aaPredicted RBP8.81□□□□□ -1
SMC4-214ENST00000472991 CATP04040 527 aaKnown RBP8.81□□□□□ -1
SMC4-214ENST00000472991 ADRB1P08588 477 aa8.81□□□□□ -1
SMC4-214ENST00000472991 TPBGLP0DKB5 382 aa8.81□□□□□ -1
SMC4-214ENST00000472991 JUPP14923 745 aa8.81□□□□□ -1
SMC4-214ENST00000472991 STMN1P16949 149 aa8.81□□□□□ -1
SMC4-214ENST00000472991 POLR2CP19387 275 aaPredicted RBP8.81□□□□□ -1
SMC4-214ENST00000472991 SPINK2P20155 84 aa8.81□□□□□ -1
SMC4-214ENST00000472991 MPSTP25325 297 aa8.81□□□□□ -1
SMC4-214ENST00000472991 PKLRP30613 574 aa8.81□□□□□ -1
SMC4-214ENST00000472991 HSD17B3P37058 310 aa8.81□□□□□ -1
SMC4-214ENST00000472991 CCNFP41002 786 aa8.81□□□□□ -1
SMC4-214ENST00000472991 IL2P60568 153 aa8.81□□□□□ -1
SMC4-214ENST00000472991 RAB10P61026 200 aa8.81□□□□□ -1
SMC4-214ENST00000472991 PPP1CAP62136 330 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms