RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TMTC4Q5T4D3 741 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 GRTP1Q5TC63 336 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 PIWIL4Q7Z3Z4 852 aaKnown RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 CTAGE3PQ8IX95 158 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 MYO1HQ8N1T3 1032 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 FLVCR1-AS1Q8TAF5 88 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 LINGO1Q96FE5 620 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 PDLIM5Q96HC4 596 aaKnown RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 IL17FQ96PD4 163 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 TRAPPC9Q96Q05 1148 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 RBBP8Q99708 897 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 OLFM1Q99784 485 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 RHOXF2Q9BQY4 288 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 FUT8Q9BYC5 575 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 POPDC3Q9HBV1 291 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 SYTL2Q9HCH5 934 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 NINJ2Q9NZG7 142 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 B3GALT1Q9Y5Z6 326 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 URB1O60287 2271 aaKnown RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 A0A087WV48 116 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SLC9B1P1A6NJY1 282 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SRRM3A6NNA2 597 aaPredicted RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 ZNF839A8K0R7 811 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 PIAS1O75925 651 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 TSPAN12O95859 305 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 ERGP11308 486 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 FGF5P12034 268 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 SLC12A2P55011 1212 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 TAS2R39P59534 338 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SH3BP2P78314 561 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 FOXM1Q08050 763 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SP140Q13342 867 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SLMAPQ14BN4 828 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 UBE2R2Q712K3 238 aaPredicted RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 NKAPQ8N5F7 415 aaKnown RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 PPM1NQ8N819 430 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 EIF1ADQ8N9N8 165 aaKnown RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 LRRN4CLQ8ND94 238 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 OR8K5Q8NH50 307 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 MCOLN3Q8TDD5 553 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 DENND1AQ8TEH3 1009 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 ANKRD7Q92527 254 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 TSPAN17Q96FV3 270 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 PPM1MQ96MI6 270 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 FCRL4Q96PJ5 515 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 OR6C1Q96RD1 312 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 CYTH2Q99418 400 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 PKP4Q99569 1192 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SLC12A9Q9BXP2 914 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 DPH1Q9BZG8 443 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 CHRNA10Q9GZZ6 450 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 CDC42EP4Q9H3Q1 356 aaKnown RBP14.77□□□□□ -0.05
SDC3-203ENST00000471567 PDE7BQ9NP56 450 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 SOHLH2Q9NX45 425 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 FOXJ2Q9P0K8 574 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 CIDEBQ9UHD4 219 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 NFU1Q9UMS0 254 aa14.77□□□□□ -0.05
SDC3-203ENST00000471567 A0A0J9YY10 115 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 PRICKLE3O43900 615 aaPredicted RBP14.76□□□□□ -0.05
SDC3-203ENST00000471567 MSL3P1P0C860 447 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 FOLR1P15328 257 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 ST6GAL1P15907 406 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 ZNF37AP17032 561 aaPredicted RBP14.76□□□□□ -0.05
SDC3-203ENST00000471567 CYP2A7P20853 494 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 SAT1P21673 171 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 OAS2P29728 719 aaKnown RBP14.76□□□□□ -0.05
SDC3-203ENST00000471567 PEBP1P30086 187 aaKnown RBP14.76□□□□□ -0.05
SDC3-203ENST00000471567 TUBB4BP68371 445 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 FBXO38Q6PIJ6 1188 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 LRRC69Q6ZNQ3 347 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 SPNS2Q8IVW8 549 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 KCNE4Q8WWG9 221 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 SMPDL3AQ92484 453 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 PMEPA1Q969W9 287 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 TCTN2Q96GX1 697 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 GPR22Q99680 433 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 CTRCQ99895 268 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 ACSS3Q9H6R3 686 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 PARVBQ9HBI1 364 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 APMAPQ9HDC9 416 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 FGF21Q9NSA1 209 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 RARRES3Q9UL19 164 aa14.76□□□□□ -0.05
SDC3-203ENST00000471567 MTO1Q9Y2Z2 717 aaKnown RBP14.76□□□□□ -0.05
SDC3-203ENST00000471567 STMND1H3BQB6 276 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 EBLN1P0CF75 366 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 LIPCP11150 499 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 TUBB3Q13509 450 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 USP10Q14694 798 aaKnown RBP14.75□□□□□ -0.05
SDC3-203ENST00000471567 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.75□□□□□ -0.05
SDC3-203ENST00000471567 TMEM207Q6UWW9 146 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 PPP1R3BQ86XI6 285 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 C2orf73Q8N5S3 287 aaPredicted RBP14.75□□□□□ -0.05
SDC3-203ENST00000471567 C19orf47Q8N9M1 422 aaKnown RBP14.75□□□□□ -0.05
SDC3-203ENST00000471567 LMNTD1Q8N9Z9 388 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 DLG3Q92796 817 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 CCDC138Q96M89 665 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 SPRY4Q9C004 299 aa14.75□□□□□ -0.05
SDC3-203ENST00000471567 INTS7Q9NVH2 962 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms