RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CLEC1AQ8NC01 280 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 SPATA22Q8NHS9 363 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 RNF128Q8TEB7 428 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 ABTB1Q969K4 478 aaPredicted RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 PHF21AQ96BD5 680 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 ZNF559Q9BR84 538 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 TMPRSS5Q9H3S3 457 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 PRMT8Q9NR22 394 aaPredicted RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 INTS10Q9NVR2 710 aaKnown RBP6.3□□□□□ -1.4
SMC5-202ENST00000471372 HMG20BQ9P0W2 317 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 AMDHD2Q9Y303 409 aa6.3□□□□□ -1.4
SMC5-202ENST00000471372 RGSL1A5PLK6 1076 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 CPLX1O14810 134 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 TNFRSF13BO14836 293 aaPredicted RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 MID1O15344 667 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 IGHV4-30-4P0DP06 118 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 MYL6BP14649 208 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 HOXB2P14652 356 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 KELP23276 732 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 JAK1P23458 1154 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 TMPOP42166 694 aaKnown RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 CDX1P47902 265 aaPredicted RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 NPBWR1P48145 328 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 RFX2P48378 723 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 MMP15P51511 669 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 GPC3P51654 580 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 ATXN3P54252 364 aaPredicted RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 CLDN15P56746 228 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 DPTQ07507 201 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 CA9Q16790 459 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 PLXDC2Q6UX71 529 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 UNC5DQ6UXZ4 953 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 C1orf186Q6ZWK4 172 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 ZNF410Q86VK4 478 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 KIAA0895Q8NCT3 520 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 OR52E1Q8NGJ3 308 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 OR13J1Q8NGT2 312 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 OR14A16Q8NHC5 309 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 SLC20A1Q8WUM9 679 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 THOC1Q96FV9 657 aaKnown RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 OXNAD1Q96HP4 312 aaPredicted RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 EPSTI1Q96J88 318 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 GDAP1L1Q96MZ0 367 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 NAP1L5Q96NT1 182 aaPredicted RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 VN1R1Q9GZP7 353 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 S1PR5Q9H228 398 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 SYTL2Q9HCH5 934 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 TCP11L1Q9NUJ3 509 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 ITM2BQ9Y287 266 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 MYRFQ9Y2G1 1151 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 STRAPQ9Y3F4 350 aaKnown RBP6.29□□□□□ -1.4
SMC5-202ENST00000471372 JRKLQ9Y4A0 524 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 PCDHAC2Q9Y5I4 1007 aa6.29□□□□□ -1.4
SMC5-202ENST00000471372 LINC01553A4QN01 128 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 ATP9AO75110 1047 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 SOCS5O75159 536 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 SERPINI2O75830 405 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 CLDN14O95500 239 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 NUDT3O95989 172 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 FAM200BP0CF97 657 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 POLR2CP19387 275 aaPredicted RBP6.28□□□□□ -1.4
SMC5-202ENST00000471372 CBLP22681 906 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 AHCYP23526 432 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 SMSP52788 366 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 BNC1Q01954 994 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 PHLDB2Q86SQ0 1253 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 PTOV1Q86YD1 416 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 DNAJC10Q8IXB1 793 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 ODF3L1Q8IXM7 274 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 CRYBG2Q8N1P7 616 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 CPSF7Q8N684 471 aaKnown RBP6.28□□□□□ -1.4
SMC5-202ENST00000471372 ZBTB44Q8NCP5 570 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 NPEPL1Q8NDH3 523 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 CNNM3Q8NE01 707 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 FGFBP3Q8TAT2 258 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 ZNF560Q96MR9 790 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 FAM111AQ96PZ2 611 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 Q9H8V8 135 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 SH3BGRL2Q9UJC5 107 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 KCNK6Q9Y257 313 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
SMC5-202ENST00000471372 DHX29Q7Z478 1369 aaKnown RBP6.28□□□□□ -1.4
SMC5-202ENST00000471372 A0A0U1RQJ8 604 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 MED19A0JLT2 244 aaPredicted RBP6.27□□□□□ -1.41
SMC5-202ENST00000471372 CASTOR2A6NHX0 329 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 ANKRD66B4E2M5 251 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE7O76087 117 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 KDM4BO94953 1096 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 C9P02748 559 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 CELA2AP08217 269 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 CDKN1AP38936 164 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 CAMLGP49069 296 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 HTR6P50406 440 aa6.27□□□□□ -1.41
SMC5-202ENST00000471372 HTD2P86397 168 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms