RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 LGMNQ99538 433 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 MUC13Q9H3R2 512 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 HEXA-AS1Q9H8Q6 139 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 MAN2C1Q9NTJ4 1040 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 SAGE1Q9NXZ1 904 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 RHCGQ9UBD6 479 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 CLIP2Q9UDT6 1046 aa1.61□□□□□ -2.15
COMMD3-209ENST00000471350 ZHX1Q9UKY1 873 aaPredicted RBP1.61□□□□□ -2.15
COMMD3-209ENST00000471350 TRIM49BA6NDI0 452 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 C2orf81A6NN90 581 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 H0YAE9 185 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 PHOX2AO14813 284 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 XRCC3O43542 346 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 MED24O75448 989 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 POP4O95707 220 aaKnown RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 HPP00738 406 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 CLTBP09497 229 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ATP1A3P13637 1013 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 GP9P14770 177 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 PRLRP16471 622 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 CSTF2P33240 577 aaKnown RBP eCLIP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 MTHFRP42898 656 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 TPD52P55327 224 aaPredicted RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 SIRPAP78324 504 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ZFP36L1Q07352 338 aaKnown RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 SQLEQ14534 574 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 XKR3Q5GH77 459 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 SLC35D3Q5M8T2 416 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 CES4AQ5XG92 561 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 IKBIPQ70UQ0 350 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 HAUS6Q7Z4H7 955 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ZER1Q7Z7L7 766 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 RTN4RL2Q86UN3 420 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 SLC25A42Q86VD7 318 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ZFAND4Q86XD8 727 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ABHD12Q8N2K0 398 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 Q8N7P7 452 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 TDRD5Q8NAT2 981 aaKnown RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 PCYOX1LQ8NBM8 494 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 OR5T2Q8NGG2 359 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 OR5M8Q8NGP6 311 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 OLIG1Q8TAK6 271 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 GATAD1Q8WUU5 269 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 PDLIM5Q96HC4 596 aaKnown RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 C10orf90Q96M02 699 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 NEK1Q96PY6 1258 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 C16orf70Q9BSU1 422 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 OR2B2Q9GZK3 357 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 NYXQ9GZU5 481 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 HRH4Q9H3N8 390 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 FAM207AQ9NSI2 230 aaPredicted RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 ZNF701Q9NV72 531 aaPredicted RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 PAG1Q9NWQ8 432 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 LARSQ9P2J5 1176 aaKnown RBP1.6□□□□□ -2.15
COMMD3-209ENST00000471350 HACL1Q9UJ83 578 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 MTUS1Q9ULD2 1270 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 GTF2A1LQ9UNN4 478 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 WIPI2Q9Y4P8 454 aa1.6□□□□□ -2.15
COMMD3-209ENST00000471350 TDRD9Q8NDG6 1382 aaKnown RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 A0A1B0GVC2 190 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 A0A1W2PR80 420 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 FRMD3A2A2Y4 597 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 ENO4A6NNW6 628 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 NPHP1O15259 732 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 MITFO75030 526 aaPredicted RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 LAMP2P13473 410 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 IL4RP24394 825 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 PTGER4P35408 488 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 MATR3P43243 847 aaKnown RBP eCLIP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 LMAN1P49257 510 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 LBX1P52954 281 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 B3GALT5-AS1P59052 145 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 KRTAP10-1P60331 282 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 TMF1P82094 1093 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 AIMP2Q13155 320 aaKnown RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 SGCGQ13326 291 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 MS4A18Q3C1V0 323 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 KIAA0930Q6ICG6 404 aaPredicted RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 LCLAT1Q6UWP7 414 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 VITQ6UXI7 678 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 ZNF841Q6ZN19 808 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 TMPRSS11FQ6ZWK6 438 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 CHST9Q7L1S5 443 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 PXKQ7Z7A4 578 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 ARHGAP24Q8N264 748 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 FGFRL1Q8N441 504 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 KLHDC1Q8N7A1 406 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 AQP11Q8NBQ7 271 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 NAXEQ8NCW5 288 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 NPEPL1Q8NDH3 523 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 OR2AJ1Q8NGZ0 328 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 OR1L3Q8NH93 324 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 TDRD7Q8NHU6 1098 aaKnown RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 CHPT1Q8WUD6 406 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 RFT1Q96AA3 541 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 SAT2Q96F10 170 aaPredicted RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 CALML4Q96GE6 196 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 CNOT6LQ96LI5 555 aaKnown RBP1.59□□□□□ -2.15
COMMD3-209ENST00000471350 SPAG5Q96R06 1193 aa1.59□□□□□ -2.15
COMMD3-209ENST00000471350 RAD9AQ99638 391 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms