RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 LRRC61Q9BV99 259 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MAK16Q9BXY0 300 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PITPNM3Q9BZ71 974 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 WWTR1Q9GZV5 400 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SHARPINQ9H0F6 387 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SMARCAD1Q9H4L7 1026 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SPHK2Q9NRA0 654 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 GKN1Q9NS71 199 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 FAM207AQ9NSI2 230 aaPredicted RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 SPHK1Q9NYA1 384 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 NUDT4Q9NZJ9 180 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 TP53TG3Q9ULZ0 132 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PPP2R2CQ9Y2T4 447 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 WBP11Q9Y2W2 641 aaKnown RBP1.21□□□□□ -2.22
UBXN4-207ENST00000471246 MOB4Q9Y3A3 225 aa1.21□□□□□ -2.22
UBXN4-207ENST00000471246 PCDH11YQ9BZA8 1340 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 IGKV6D-41A0A0C4DH26 115 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 A0A1W2PR80 420 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR2A25A4D2G3 310 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 EPM2AB3EWF7 344 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 IDH3BO43837 385 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 AVILO75366 819 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SEC24AO95486 1093 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 BCL10O95999 233 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR2T7P0C7T2 308 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 HAPLN1P10915 354 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 HSPA8P11142 646 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 DARSP14868 501 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 GJA1P17302 382 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CAPN2P17655 700 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CAPN3P20807 821 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CDH3P22223 829 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 LHCGRP22888 699 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MNDAP41218 407 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 RPL21P46778 160 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 NRIP1P48552 1158 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 LBX1P52954 281 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MAZP56270 477 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 KRTAP12-2P59991 146 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 HERV-K104P61576 105 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CYCSP99999 105 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MS4A2Q01362 244 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MC1RQ01726 317 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 GCNT1Q02742 428 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CREB5Q02930 508 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF415Q09FC8 603 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 TAF10Q12962 218 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CALCOCO2Q13137 446 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 DDX10Q13206 875 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 NFATC2Q13469 925 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 RAPSNQ13702 412 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 FASTKD3Q14CZ7 662 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 HERC3Q15034 1050 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ODF4Q2M2E3 257 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 DUSP28Q4G0W2 176 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 XKR3Q5GH77 459 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 PLEKHS1Q5SXH7 462 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 C20orf194Q5TEA3 1177 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SLC25A47Q6Q0C1 308 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ADIPOR2Q86V24 386 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 KBTBD6Q86V97 674 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 TMEM173Q86WV6 379 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CATSPERDQ86XM0 798 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 EID3Q8N140 333 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 Q8N377 158 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 Q8NBF4 154 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 PRSS33Q8NF86 280 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR13C3Q8NGS6 347 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR6S1Q8NH40 331 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR1L3Q8NH93 324 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MIPOL1Q8TD10 442 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 GATAD1Q8WUU5 269 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 LPGAT1Q92604 370 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ARHGAP45Q92619 1136 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SLCO2A1Q92959 643 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF486Q96H40 463 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 PRICKLE1Q96MT3 831 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MS4A10Q96PG2 267 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CDRT15Q96T59 188 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 RAD9AQ99638 391 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CHCHD6Q9BRQ6 235 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 KIFC3Q9BVG8 833 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR2B2Q9GZK3 357 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 THAP2Q9H0W7 228 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 CPVLQ9H3G5 476 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SYNCQ9H7C4 482 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 Q9N2K0 584 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SERINC1Q9NRX5 453 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 MAN2C1Q9NTJ4 1040 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 PANK4Q9NVE7 773 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 FAM120CQ9NX05 1096 aaKnown RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 TEX10Q9NXF1 929 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 ARHGEF38Q9NXL2 777 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 PSD3Q9NYI0 1048 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 OR6C2Q9NZP2 312 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 SUCLA2Q9P2R7 463 aaPredicted RBP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 B3GAT1Q9P2W7 334 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.2□□□□□ -2.22
UBXN4-207ENST00000471246 STUB1Q9UNE7 303 aa1.2□□□□□ -2.22
UBXN4-207ENST00000471246 TNNQ9UQP3 1299 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms