RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 FAM86B1E9PN63 330 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TULP2O00295 520 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 NTN1O95631 604 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 PPP1R3DO95685 299 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 IGHV4-39P01824 125 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 FAM86B2P0C5J1 330 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 SUPT20HL2P0C7V6 817 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TCF4P15884 667 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 EPCAMP16422 314 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TNFRSF8P28908 595 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TKTP29401 623 aaKnown RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 PTGER4P35408 488 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 WNT5AP41221 380 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 FMO5P49326 533 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 HOXA1P49639 335 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 THBS3P49746 956 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF132P52740 706 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 DMPKQ09013 629 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ITGA7Q13683 1181 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 KEAP1Q14145 624 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 RRS1Q15050 365 aaKnown RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 CA9Q16790 459 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 MEP1BQ16820 701 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 CDO1Q16878 200 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TYSND1Q2T9J0 566 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ANKRD20A4Q4UJ75 823 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ANKRD20A8PQ5CZ79 823 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 LRRC73Q5JTD7 316 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ANKRD20A2Q5SQ80 823 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ANKRD20A1Q5TYW2 823 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ANKRD20A3Q5VUR7 823 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 C9orf57Q5W0N0 161 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF449Q6P9G9 518 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 IYDQ6PHW0 289 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF852Q6ZMS4 543 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 LINC00696Q6ZRV3 163 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 OTOAQ7RTW8 1153 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 EXOC3L1Q86VI1 746 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 HOOK3Q86VS8 718 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 UNC45BQ8IWX7 931 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 CCDC170Q8IYT3 715 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 RYBPQ8N488 228 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 NHLRC2Q8NBF2 726 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 MSANTD4Q8NCY6 345 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 NPEPL1Q8NDH3 523 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 VANGL1Q8TAA9 524 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 FGFBP3Q8TAT2 258 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 HEXDCQ8WVB3 486 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 SECTM1Q8WVN6 248 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 RAD54LQ92698 747 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 DNASE1L2Q92874 299 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 EXOC4Q96A65 974 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 SPATA33Q96N06 139 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 MYADMQ96S97 322 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 PARK7Q99497 189 aaKnown RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 C1QTNF4Q9BXJ3 329 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 MIS12Q9H081 205 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 HIPK2Q9H2X6 1198 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 EVA1AQ9H8M9 152 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 DNAJC4Q9NNZ3 241 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 SPHK1Q9NYA1 384 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 LEF1Q9UJU2 399 aaPredicted RBP3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ITGA11Q9UKX5 1188 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 MTUS1Q9ULD2 1270 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 SLC7A7Q9UM01 511 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 LIPT1Q9Y234 373 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 ADAMTS12P58397 1594 aa3.8□□□□□ -1.8
PRPF3-204ENST00000470824 A0A1W2PPW3 197 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 SLC30A4O14863 429 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 SLC28A2O43868 658 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 PGLSO95336 258 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 SPP1P10451 314 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 HAPLN1P10915 354 aaPredicted RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 HSPA8P11142 646 aaKnown RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 IRF2P14316 349 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 MNDAP41218 407 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 ALDH3A2P51648 485 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 DVL1P1P54792 670 aaPredicted RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 TNK1Q13470 666 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 NPTX1Q15818 432 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 IZUMO4Q1ZYL8 232 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 CORO6Q6QEF8 472 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 PRSS57Q6UWY2 283 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF517Q6ZMY9 492 aaPredicted RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 DSG4Q86SJ6 1040 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 PHLDB2Q86SQ0 1253 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF554Q86TJ5 538 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 SLC9B2Q86UD5 537 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 NAGSQ8N159 534 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF713Q8N859 430 aaPredicted RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 CTCFLQ8NI51 663 aaPredicted RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 ZNF473Q8WTR7 871 aaKnown RBP3.79□□□□□ -1.8
PRPF3-204ENST00000470824 UBE2Q2Q8WVN8 375 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 SCRN2Q96FV2 425 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 RAD9AQ99638 391 aa3.79□□□□□ -1.8
PRPF3-204ENST00000470824 RTP3Q9BQQ7 232 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms