RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PQLC3Q8N755 202 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 SPATA22Q8NHS9 363 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ZNF398Q8TD17 642 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 FAF2Q96CS3 445 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 TRIM11Q96F44 468 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ZNF830Q96NB3 372 aaPredicted RBP11.46□□□□□ -0.57
LSM2-209ENST00000470083 ALPK1Q96QP1 1244 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 COG4Q9H9E3 785 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ENAMQ9NRM1 1142 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 OR6C2Q9NZP2 312 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 HACD3Q9P035 362 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 MYO1AQ9UBC5 1043 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 ST6GALNAC2Q9UJ37 374 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 C3orf18Q9UK00 162 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 PKP3Q9Y446 797 aa11.46□□□□□ -0.57
LSM2-209ENST00000470083 NPIPA5E9PKD4 350 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 ZWINTO95229 277 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 TSPAN12O95859 305 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 ZGLP1P0C6A0 271 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 MSX1P28360 303 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 OR1D4P47884 311 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 AP2B1P63010 937 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 ADAM8P78325 824 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 ALDH6A1Q02252 535 aaKnown RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 OCA2Q04671 838 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 GRM7Q14831 915 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 NOMO1Q15155 1222 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 ZNF658BQ4V348 819 aaPredicted RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 ABHD17BQ5VST6 288 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 C3P1Q6ZMU1 363 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 Q71RC1 249 aaPredicted RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 CXXC5Q7LFL8 322 aaKnown RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 GLT6D1Q7Z4J2 308 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 STT3BQ8TCJ2 826 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 TFGQ92734 400 aaPredicted RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 MIEF2Q96C03 454 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 TSPAN10Q9H1Z9 355 aaPredicted RBP11.45□□□□□ -0.58
LSM2-209ENST00000470083 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 RIC8BQ9NVN3 520 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 NPIPA1Q9UND3 350 aa11.45□□□□□ -0.58
LSM2-209ENST00000470083 FBN1P35555 2871 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 IGHV1-45A0A0A0MS14 117 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 LOC285095A0A1B0GVY8 99 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 ASPDHA6ND91 283 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 PRRG2O14669 202 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 TTI1O43156 1089 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 CELA2AP08217 269 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 HOXD4P09016 255 aaPredicted RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 RALBP11234 206 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 PDHA2P29803 388 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 MEOX1P50221 254 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 RPA4Q13156 261 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 MYBPHQ13203 477 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 OLIG2Q13516 323 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 PDK2Q15119 407 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 TCTE1Q5JU00 501 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 SIAH3Q8IW03 269 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 CHERPQ8IWX8 916 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 PRSS58Q8IYP2 241 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 GHDCQ8N2G8 530 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 METTL27Q8N6F8 245 aaPredicted RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 BLOC1S5Q8TDH9 187 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 ASB5Q8WWX0 329 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 ARSGQ96EG1 525 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 DCUN1D1Q96GG9 259 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 SMR3AQ99954 134 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 TRIM51Q9BSJ1 452 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 GLOD4Q9HC38 313 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 DNAJB12Q9NXW2 375 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 STMN3Q9NZ72 180 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 ZNF282Q9UDV7 671 aaPredicted RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 TEKT2Q9UIF3 430 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 MAU2Q9Y6X3 613 aa11.44□□□□□ -0.58
LSM2-209ENST00000470083 INTS1Q8N201 2190 aaKnown RBP11.44□□□□□ -0.58
LSM2-209ENST00000470083 FITM1A5D6W6 292 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 LGALS16A8MUM7 142 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 ASNA1O43681 348 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 TOXO94900 526 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 EPOP01588 193 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 ITGAMP11215 1152 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 MAGP20916 626 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 MCM3P25205 808 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
LSM2-209ENST00000470083 EEF1A2Q05639 463 aaKnown RBP11.43□□□□□ -0.58
LSM2-209ENST00000470083 ZNF33BQ06732 778 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 AP1B1Q10567 949 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 KIR2DS3Q14952 304 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 SIRPB2Q5JXA9 342 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 TMEM198Q66K66 360 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 NEK10Q6ZWH5 1172 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
LSM2-209ENST00000470083 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
LSM2-209ENST00000470083 TTC29Q8NA56 475 aaPredicted RBP11.43□□□□□ -0.58
LSM2-209ENST00000470083 OR5AR1Q8NGP9 310 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms