RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 VPS50Q96JG6 964 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.448e-8■■■■□ 26.5
TRAPPC12-216ENST00000469400 GBA3Q9H227 469 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 CUTCQ9NTM9 273 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 PLA2G3Q9NZ20 509 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 POLG2Q9UHN1 485 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 NXT1Q9UKK6 140 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 HYOU1Q9Y4L1 999 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 PCNX1Q96RV3 2341 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 NUP210LQ5VU65 1888 aa12.29□□□□□ -0.44
TRAPPC12-216ENST00000469400 TRAV17A0A0B4J275 112 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 TRBV5-4A0A0C4DH59 114 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 DYTNA2CJ06 578 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 VSTM2BA6NLU5 285 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 DSCR3O14972 297 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 UNC5CO95185 931 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 HPP00738 406 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 GYPCP04921 128 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 GSTM1P09488 218 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 PRSS56P0CW18 603 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 MAGP20916 626 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 MCM3P25205 808 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 MST1P26927 711 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 MC4RP32245 332 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 CA7P43166 264 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 OR1D4P47884 311 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 TNFSF10P50591 281 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 FANCCQ00597 558 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 GSTM4Q03013 218 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 INAQ16352 499 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 MTFR2Q6P444 385 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 SERPINA9Q86WD7 417 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 METTL27Q8N6F8 245 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 OR5K2Q8NHB8 316 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 HAUS1Q96CS2 278 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 IQCDQ96DY2 449 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 C10orf88Q9H8K7 445 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 ZNF160Q9HCG1 818 aa12.28□□□□□ -0.44
TRAPPC12-216ENST00000469400 HACD1B0YJ81 288 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 LIN7AO14910 233 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 USP1O94782 785 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 AP2A2O94973 939 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 AP2A1O95782 977 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 ACPPP15309 386 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 SOX11P35716 441 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 SLC1A1P43005 524 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 GRM7Q14831 915 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 IQCB1Q15051 598 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 BRD3Q15059 726 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 ASTE1Q2TB18 679 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 YOD1Q5VVQ6 348 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 XKRXQ6PP77 449 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 TAS2R42Q7RTR8 314 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 KBTBD2Q8IY47 623 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 DTWD1Q8N5C7 304 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 PSMF1Q92530 271 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 HAS2Q92819 552 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 DNAJC1Q96KC8 554 aaKnown RBP12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 C19orf43Q9BQ61 176 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 CRB3Q9BUF7 120 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 PTGFRNQ9P2B2 879 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 SEC14L3Q9UDX4 400 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 PRSS21Q9Y6M0 314 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 MAU2Q9Y6X3 613 aa12.27□□□□□ -0.45
TRAPPC12-216ENST00000469400 F10P00742 488 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 COMTP21964 271 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 RBL1P28749 1068 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 SSTR2P30874 369 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 GRIA3P42263 894 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 CARSP49589 748 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 UBASH3AP57075 661 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 KLC1Q07866 573 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 DBN1Q16643 649 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 TFDP3Q5H9I0 405 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 ATG9BQ674R7 924 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 ITPRIPL1Q6GPH6 555 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 DENND5AQ6IQ26 1287 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 NAPRTQ6XQN6 538 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 SPNS3Q6ZMD2 512 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 NLRP9Q7RTR0 991 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 PIANPQ8IYJ0 282 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 PRSS58Q8IYP2 241 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 BRIX1Q8TDN6 353 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 ELMO1Q92556 727 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 C8orf44Q96CB5 159 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 ENAMQ9NRM1 1142 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 IL1RAPL1Q9NZN1 696 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 ABI3Q9P2A4 366 aa12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 AAR2Q9Y312 384 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 SNRNP200O75643 2136 aaKnown RBP12.26□□□□□ -0.45
TRAPPC12-216ENST00000469400 hCG_1818297A0A087WSY0 165 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms