RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 IKBKGQ9Y6K9 419 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 CDH23Q9H251 3354 aa4.04□□□□□ -1.76
TMEM39A-204ENST00000468545 GLYATL1P3A0A0U1RQE8 302 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ZCWPW2A0A1B0GU75 182 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 UBE2QL1A1L167 161 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 IGLON5A6NGN9 336 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CAPN8A6NHC0 703 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GOLGA6L10A6NI86 522 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FOXO6A8MYZ6 492 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PATE3B3GLJ2 98 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RASGRF2O14827 1237 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 INPP4BO15327 924 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC31A1O15431 190 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CD3EAPO15446 510 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RGS16O15492 202 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 NDUFS3O75489 264 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SPAG6O75602 509 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RFPL1O75677 317 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 HAUS5O94927 633 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 IL33O95760 270 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PAK4O96013 591 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PCCBP05166 539 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 INHBAP08476 426 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GSTA2P09210 222 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 C1SP09871 688 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ELFN1P0C7U0 828 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TSHRP16473 764 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GABRG2P18507 467 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 LHCGRP22888 699 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FMO4P31512 558 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SPAM1P38567 509 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GPR1P46091 355 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MPP1Q00013 466 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PDE1BQ01064 536 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SIGLEC14Q08ET2 396 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CCDC15Q0P6D6 951 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ELP6Q0PNE2 266 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MTAPQ13126 283 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SGCGQ13326 291 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ENPP2Q13822 863 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 BMPR2Q13873 1038 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GRM7Q14831 915 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TMED2Q15363 201 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CHRNA6Q15825 494 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CDKN3Q16667 212 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 KLHL38Q2WGJ6 581 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 UAP1L1Q3KQV9 507 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 KRT71Q3SY84 523 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 KBTBD12Q3ZCT8 623 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TTC31Q49AM3 519 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TMEM52BQ4KMG9 183 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PIP5KL1Q5T9C9 394 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TEDDM1Q5T9Z0 273 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 STEAP4Q687X5 459 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 KCTD16Q68DU8 428 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PDPK2PQ6A1A2 396 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 NEPROQ6NW34 567 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TSSK4Q6SA08 328 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 LRIG3Q6UXM1 1119 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 Q6ZVL8 140 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 DPPA4Q7L190 304 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SYT13Q7L8C5 426 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SDCCAG8Q86SQ7 713 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TMEM135Q86UB9 458 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 DENND6AQ8IWF6 608 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RAVER1Q8IY67 606 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 IQCKQ8N0W5 287 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MREGQ8N565 214 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FRMD1Q8N878 549 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GPR26Q8NDV2 337 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PJA1Q8NG27 643 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 OR5M3Q8NGP4 307 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 OR13J1Q8NGT2 312 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 GDAP1Q8TB36 358 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF398Q8TD17 642 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 HCAR2Q8TDS4 363 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 NAT14Q8WUY8 206 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 EDAQ92838 391 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SCAMP4Q969E2 229 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RELTQ969Z4 430 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ARL8AQ96BM9 186 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 AP2M1Q96CW1 435 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 EID2BQ96D98 161 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CERS2Q96G23 380 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MRGPRX1Q96LB2 322 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CYTH2Q99418 400 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PAFAH2Q99487 392 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MYOCQ99972 504 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 RIOK2Q9BVS4 552 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 SPATA16Q9BXB7 569 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM83DQ9H4H8 585 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TRABDQ9H4I3 376 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ASB8Q9H765 288 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PLAC1Q9HBJ0 212 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 MRM3Q9HC36 420 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 CD93Q9NPY3 652 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 FBXO6Q9NRD1 293 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 TREX1Q9NSU2 369 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 PLA2G3Q9NZ20 509 aa4.03□□□□□ -1.76
TMEM39A-204ENST00000468545 ZIM2Q9NZV7 527 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms