RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 PRSS21Q9Y6M0 314 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 IGLV3-12A0A075B6K2 115 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 DSCR3O14972 297 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 PSTPIP1O43586 416 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 PRICKLE3O43900 615 aaPredicted RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 MED26O95402 600 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 RBL1P28749 1068 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 PKLRP30613 574 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 MC4RP32245 332 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 TNNT3P45378 269 aaPredicted RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 ARSFP54793 590 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 HADHBP55084 474 aaKnown RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 UBASH3AP57075 661 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 KCNK10P57789 538 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 DBN1Q16643 649 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 TUBB8Q3ZCM7 444 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 YOD1Q5VVQ6 348 aaPredicted RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 KCTD11Q693B1 232 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 PACS1Q6VY07 963 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 TTLL10Q6ZVT0 673 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 BBS12Q6ZW61 710 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 FAM20CQ8IXL6 584 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 PARP9Q8IXQ6 854 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 DLG3Q92796 817 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 HAS2Q92819 552 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 CCDC120Q96HB5 630 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 DNAJC1Q96KC8 554 aaKnown RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 RUBCNLQ9H714 662 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 VPS37BQ9H9H4 285 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 SEMA3GQ9NS98 782 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 TXLNGQ9NUQ3 528 aa11.68□□□□□ -0.54
UBR4-211ENST00000467272 NLE1Q9NVX2 485 aaPredicted RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 NXT1Q9UKK6 140 aaKnown RBP11.68□□□□□ -0.54
UBR4-211ENST00000467272 APOC4-APOC2K7ER74 178 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 HPP00738 406 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 APOC2P02655 101 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 MAGP20916 626 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 MST1P26927 711 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 MARCKSL1P49006 195 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 GDF7Q7Z4P5 450 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 ZNF808Q8N4W9 903 aaPredicted RBP11.67□□□□□ -0.54
UBR4-211ENST00000467272 DTWD1Q8N5C7 304 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 DENND1AQ8TEH3 1009 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 N4BP2L2Q92802 583 aaPredicted RBP11.67□□□□□ -0.54
UBR4-211ENST00000467272 THOC3Q96J01 351 aaKnown RBP11.67□□□□□ -0.54
UBR4-211ENST00000467272 CNDP1Q96KN2 507 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 EPS8L2Q9H6S3 715 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 CHST11Q9NPF2 352 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 CUTCQ9NTM9 273 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 FEZ2Q9UHY8 353 aaPredicted RBP11.67□□□□□ -0.54
UBR4-211ENST00000467272 ASF1AQ9Y294 204 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 KLHL20Q9Y2M5 609 aa11.67□□□□□ -0.54
UBR4-211ENST00000467272 AAR2Q9Y312 384 aaKnown RBP11.67□□□□□ -0.54
UBR4-211ENST00000467272 SNRNP200O75643 2136 aaKnown RBP11.66□□□□□ -0.54
UBR4-211ENST00000467272 MROH6A6NGR9 719 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 WISP2O76076 250 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 PIM1P11309 404 aaPredicted RBP11.66□□□□□ -0.54
UBR4-211ENST00000467272 ALAS2P22557 587 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 MCM3P25205 808 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 PSMB4P28070 264 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 HTR1EP28566 365 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 CA7P43166 264 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 RAB28P51157 221 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 KAZNQ674X7 775 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ITPRIPL1Q6GPH6 555 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 LINC00696Q6ZRV3 163 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 OR8K1Q8NGG5 319 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 HAUS1Q96CS2 278 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 CDKN2AIPNLQ96HQ2 116 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 GBP4Q96PP9 640 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 CHP1Q99653 195 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 SOX17Q9H6I2 414 aaPredicted RBP11.66□□□□□ -0.54
UBR4-211ENST00000467272 SPTLC3Q9NUV7 552 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ABI3Q9P2A4 366 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 INTUQ9ULD6 942 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 PLAGL1Q9UM63 463 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 ALG6Q9Y672 507 aa11.66□□□□□ -0.54
UBR4-211ENST00000467272 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 CTSVO60911 334 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 GPC4O75487 556 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
UBR4-211ENST00000467272 PRR35P0CG20 571 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 COX6A1P12074 109 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 AGAP20933 346 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 NSG1P42857 185 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 OR1D4P47884 311 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 ADORA2A-AS1P86434 159 aa11.65□□□□□ -0.54
UBR4-211ENST00000467272 PLOD1Q02809 727 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms