RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 AGRPO00253 132 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 TAF4O00268 1085 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 NVLO15381 856 aaKnown RBP19.65■□□□□ 0.74
SKA3-205ENST00000465471 TLX3O43711 291 aaPredicted RBP19.65■□□□□ 0.74
SKA3-205ENST00000465471 PRICKLE3O43900 615 aaPredicted RBP19.65■□□□□ 0.74
SKA3-205ENST00000465471 FAM155BO75949 473 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 ACSL3O95573 720 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 C8GP07360 202 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 FAM153BP0C7A2 387 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 SPRP35270 261 aaPredicted RBP19.65■□□□□ 0.74
SKA3-205ENST00000465471 SEPHS1P49903 392 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 ZKSCAN8Q15776 578 aaPredicted RBP19.65■□□□□ 0.74
SKA3-205ENST00000465471 FAM153CQ494X1 144 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 ANKS6Q68DC2 871 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 MYO1HQ8N1T3 1032 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 D2HGDHQ8N465 521 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 PMEPA1Q969W9 287 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 TAAR9Q96RI9 348 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 DDA1Q9BW61 102 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 FBXO8Q9NRD0 319 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 ADAMTS6Q9UKP5 1117 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 SLC39A10Q9ULF5 831 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 USP24Q9UPU5 2620 aa19.65■□□□□ 0.74
SKA3-205ENST00000465471 SLC16A5O15375 505 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 SLU7O95391 586 aaKnown RBP19.64■□□□□ 0.73
SKA3-205ENST00000465471 ZBTB11O95625 1053 aaPredicted RBP19.64■□□□□ 0.73
SKA3-205ENST00000465471 ABHD2P08910 425 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 MAPK10P53779 464 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 RAB15P59190 212 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 ZNF460Q14592 562 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 ARHGAP19Q14CB8 494 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 SLC5A12Q1EHB4 618 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 FBXO38Q6PIJ6 1188 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 UBE2R2Q712K3 238 aaPredicted RBP19.64■□□□□ 0.73
SKA3-205ENST00000465471 FAM129CQ86XR2 697 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 LMNTD1Q8N9Z9 388 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 USP7Q93009 1102 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 TRAPPC9Q96Q05 1148 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 PKP4Q99569 1192 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 SLC12A9Q9BXP2 914 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 ANKRD11Q6UB99 2663 aaPredicted RBP19.64■□□□□ 0.73
SKA3-205ENST00000465471 ZFHX4Q86UP3 3567 aa19.64■□□□□ 0.73
SKA3-205ENST00000465471 A0A1W2PPV9 198 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 ZBTB14O43829 449 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 PRAMEF10O60809 474 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 ST6GAL1P15907 406 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 CDH3P22223 829 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 SLC5A2P31639 672 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 TUBB4BP68371 445 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 SH3BP2P78314 561 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 HSD11B2P80365 405 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 TRMT10CQ7L0Y3 403 aaKnown RBP19.63■□□□□ 0.73
SKA3-205ENST00000465471 GSPT2Q8IYD1 628 aaKnown RBP19.63■□□□□ 0.73
SKA3-205ENST00000465471 RAB42Q8N4Z0 105 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 NKAPQ8N5F7 415 aaKnown RBP19.63■□□□□ 0.73
SKA3-205ENST00000465471 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 FGF11Q92914 225 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 TSPAN17Q96FV3 270 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 CAB39LQ9H9S4 337 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 SYTL2Q9HCH5 934 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 SLC39A1Q9NY26 324 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 FOXJ2Q9P0K8 574 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 IKZF3Q9UKT9 509 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 PDE10AQ9Y233 779 aa19.63■□□□□ 0.73
SKA3-205ENST00000465471 A0A0J9YY10 115 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 HMX2A2RU54 273 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 SLC9B1P1A6NJY1 282 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 SLC16A8O95907 504 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 MSL3P1P0C860 447 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 SAT1P21673 171 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 HSD17B2P37059 387 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 CSRP3P50461 194 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 FASTKQ14296 549 aaKnown RBP19.62■□□□□ 0.73
SKA3-205ENST00000465471 TRIM73Q86UV7 250 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 LRRC56Q8IYG6 542 aaPredicted RBP19.62■□□□□ 0.73
SKA3-205ENST00000465471 ZNF480Q8WV37 535 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 ANKRD49Q8WVL7 239 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 SLC44A1Q8WWI5 657 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.62■□□□□ 0.73
SKA3-205ENST00000465471 SLC22A18Q96BI1 424 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 TEFMQ96QE5 360 aaKnown RBP19.62■□□□□ 0.73
SKA3-205ENST00000465471 CHRNA10Q9GZZ6 450 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 EPB41L4BQ9H329 900 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 PARVBQ9HBI1 364 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 GPAMQ9HCL2 828 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 APMAPQ9HDC9 416 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 LNPEPQ9UIQ6 1025 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 B3GALT1Q9Y5Z6 326 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 AHCTF1Q8WYP5 2266 aa19.62■□□□□ 0.73
SKA3-205ENST00000465471 SDK2Q58EX2 2172 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 ISM1B1AKI9 464 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 FKBP9O95302 570 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 PVRP15151 417 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 FOLR1P15328 257 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 STMN1P16949 149 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 CYP2A7P20853 494 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 MAP4P27816 1152 aaKnown RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 IMPA1P29218 277 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 OAS2P29728 719 aaKnown RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 PMS2P54278 862 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms