RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MVB12BQ9H7P6 319 aa16.97■□□□□ 0.31
CPSF4-209ENST00000465132 TBC1D29Q9UFV1 150 aa16.97■□□□□ 0.31
CPSF4-209ENST00000465132 PLAAQ9Y263 795 aa16.97■□□□□ 0.31
CPSF4-209ENST00000465132 MTO1Q9Y2Z2 717 aaKnown RBP16.97■□□□□ 0.31
CPSF4-209ENST00000465132 ARHGEF17Q96PE2 2063 aaPredicted RBP16.97■□□□□ 0.31
CPSF4-209ENST00000465132 STMND1H3BQB6 276 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PPM1DO15297 605 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 FGF3P11487 239 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 SFTPCP11686 197 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 RPL10P27635 214 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 CSRP3P50461 194 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 KPNA2P52292 529 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 SQSTM1Q13501 440 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 TRA2AQ13595 282 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 SEPT7Q16181 437 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 RBM20Q5T481 1227 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 HDXQ7Z353 690 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 SFRP1Q8N474 314 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 SIDT2Q8NBJ9 832 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 OR4D9Q8NGE8 314 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 CD200R1Q8TD46 325 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 JPH3Q8WXH2 748 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PDLIM5Q96HC4 596 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 C12orf66Q96MD2 445 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 TAAR9Q96RI9 348 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 TRIM54Q9BYV2 358 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 OR52A5Q9H2C5 316 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 TRIT1Q9H3H1 467 aaKnown RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 ACBD3Q9H3P7 528 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PRDM8Q9NQV8 689 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 ACOT9Q9Y305 439 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PLEKHM1Q9Y4G2 1056 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PCDHGA3Q9Y5H0 932 aa16.96■□□□□ 0.31
CPSF4-209ENST00000465132 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-209ENST00000465132 IGHV1OR21-1A0A087WYE8 117 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 PIAS1O75925 651 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 CATP04040 527 aaKnown RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 C8GP07360 202 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 UQCRHP07919 91 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 MYZAPP0CAP1 466 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 MTHFD1P11586 935 aaKnown RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 COL6A2P12110 1019 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 KRT15P19012 456 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 MAP4P27816 1152 aaKnown RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 FASLGP48023 281 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 CDKN2DP55273 166 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 TAS2R39P59534 338 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 ATP6V0D1P61421 351 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 NFKB2Q00653 900 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 SP140Q13342 867 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 ZNF658BQ4V348 819 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 NKAIN2Q5VXU1 208 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 CAPRIN2Q6IMN6 1127 aaKnown RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 KLC3Q6P597 504 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 KLHL35Q6PF15 583 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 FAM83HQ6ZRV2 1179 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 TBC1D21Q8IYX1 336 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 ACMSDQ8TDX5 336 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 TFGQ92734 400 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 NKD1Q969G9 470 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 PMEPA1Q969W9 287 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 TRIM4Q9C037 500 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 EPB41L1Q9H4G0 881 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 UCK1Q9HA47 277 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 IMP3Q9NV31 184 aaKnown RBP16.95■□□□□ 0.3
CPSF4-209ENST00000465132 IL17BQ9UHF5 180 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 PSMD13Q9UNM6 376 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 ASF1AQ9Y294 204 aa16.95■□□□□ 0.3
CPSF4-209ENST00000465132 TLDC2A0PJX2 215 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 A6NCN8 305 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 TERTO14746 1132 aaKnown RBP16.94■□□□□ 0.3
CPSF4-209ENST00000465132 SLC16A5O15375 505 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ZBTB14O43829 449 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 FAM155BO75949 473 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 MT-ND3P03897 115 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 HIST1H2AGP0C0S8 130 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ZNF37AP17032 561 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-209ENST00000465132 HIST1H2ADP20671 130 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 CYP2A7P20853 494 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 CSF2RBP32927 897 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 PREPP48147 710 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ATP1A2P50993 1020 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 GBX1Q14549 363 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ZKSCAN8Q15776 578 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-209ENST00000465132 RPE65Q16518 533 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 PAQR3Q6TCH7 311 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 ATG14Q6ZNE5 492 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 MICALCLQ6ZW33 695 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 AGBL5Q8NDL9 886 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 LKAAEAR1Q8TD35 194 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 NAT14Q8WUY8 206 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 HIST1H2AHQ96KK5 128 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 HIST1H2AJQ99878 128 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 DPYSL5Q9BPU6 564 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 H2AFJQ9BTM1 129 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 RAB11FIP5Q9BXF6 653 aa16.94■□□□□ 0.3
CPSF4-209ENST00000465132 SLC12A9Q9BXP2 914 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms