RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 OR2A25A4D2G3 310 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PRR23AA6NEV1 266 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 YJEFN3A6XGL0 299 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TPD52L2O43399 206 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TBX1O43435 398 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 B4GAT1O43505 415 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 UGT2B17O75795 530 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PDE9AO76083 593 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ZBTB7AO95365 584 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 MT-CO1P00395 513 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC4A1P02730 911 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 FYNP06241 537 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ALOX12P18054 663 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CD72P21854 359 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PPIBP23284 216 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 LMO2P25791 158 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 RPL9P32969 192 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 NUDT1P36639 197 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PBX3P40426 434 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC15A1P46059 708 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 STC1P52823 247 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 UGT2B15P54855 530 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DIO3P55073 304 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 MLLT10P55197 1068 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CDKN2DP55273 166 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 YBEYP58557 167 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CXCL9Q07325 125 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ITKQ08881 620 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DMPKQ09013 629 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 C19orf57Q0VDD7 668 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 MAD2L1BPQ15013 274 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CDK10Q15131 360 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 MAPK11Q15759 364 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DPY19L1Q2PZI1 675 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CTU2Q2VPK5 515 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TTLL9Q3SXZ7 439 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PAGE3Q5JUK9 113 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF362Q5T0B9 420 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 OR2T5Q6IEZ7 315 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CYP20A1Q6UW02 462 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CCBE1Q6UXH8 406 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CCDC81Q6ZN84 652 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ARHGAP36Q6ZRI8 547 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM92BQ6ZTR7 304 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF367Q7RTV3 350 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PIWIL3Q7Z3Z3 882 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SNX20Q7Z614 316 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ADAMTSL2Q86TH1 951 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 C1orf52Q8N6N3 182 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF548Q8NEK5 533 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 OR2T29Q8NH02 315 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 OR4L1Q8NH43 312 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 FBXO30Q8TB52 745 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 METTL6Q8TCB7 284 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PROKR1Q8TCW9 393 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CHTF18Q8WVB6 975 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PTERQ96BW5 349 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DCPSQ96C86 337 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PABPC5Q96DU9 382 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CELF6Q96J87 481 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DHRS1Q96LJ7 313 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PPM1MQ96MI6 270 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF583Q96ND8 569 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 COL21A1Q96P44 957 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PITX2Q99697 317 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC29A3Q9BZD2 475 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 DPY30Q9C005 99 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 AMBRA1Q9C0C7 1298 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC39A8Q9C0K1 460 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 POLR1EQ9GZS1 481 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 KCNH6Q9H252 994 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SMOC2Q9H3U7 446 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TUBB1Q9H4B7 451 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 RIBC2Q9H4K1 309 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 REEP1Q9H902 201 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SMURF2Q9HAU4 748 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CSNK1G1Q9HCP0 422 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 TNFRSF12AQ9NP84 129 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SEMA4BQ9NPR2 832 aaPredicted RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SACM1LQ9NTJ5 587 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 INTS7Q9NVH2 962 aaKnown RBP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 C1orf109Q9NX04 203 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 QPCTLQ9NXS2 382 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CD274Q9NZQ7 290 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 ERVK-18Q9QC07 812 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PHF11Q9UIL8 331 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 PCTPQ9UKL6 214 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 RNF6Q9Y252 685 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 KLK4Q9Y5K2 254 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 CSADQ9Y600 493 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 SMIM35A0A1B0GVV1 85 aa7.02□□□□□ -1.29
CLSTN1-204ENST00000464286 LOC285095A0A1B0GVY8 99 aa7.02□□□□□ -1.29
CLSTN1-204ENST00000464286 ASPDHA6ND91 283 aa7.02□□□□□ -1.29
CLSTN1-204ENST00000464286 PABPN1LA6NDY0 278 aaKnown RBP7.02□□□□□ -1.29
CLSTN1-204ENST00000464286 HMX3A6NHT5 357 aa7.02□□□□□ -1.29
CLSTN1-204ENST00000464286 C2orf81A6NN90 581 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms