RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 APMAPQ9HDC9 416 aa12.63□□□□□ -0.39
R3HDM1-213ENST00000463230 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
R3HDM1-213ENST00000463230 ZFATQ9P243 1243 aa12.63□□□□□ -0.39
R3HDM1-213ENST00000463230 SPAG6O75602 509 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 AHSGP02765 367 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ERGP11308 486 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 SP140Q13342 867 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 CCDC81Q6ZN84 652 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 C19orf47Q8N9M1 422 aaKnown RBP12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 OR9A1PQ8NGU1 263 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 KIAA1143Q96AT1 154 aaPredicted RBP12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ULBP3Q9BZM4 244 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 KLK4Q9Y5K2 254 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 GFYI3L273 518 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 SLC16A5O15375 505 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 KRT37O76014 449 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ST6GAL1P15907 406 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 GABRB3P28472 473 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 TRMT10BQ6PF06 316 aaKnown RBP12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ASB11Q8WXH4 323 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 CDKL2Q92772 493 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 ZNF501Q96CX3 271 aaPredicted RBP12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 TSPYL1Q9H0U9 437 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 GALPQ9UBC7 116 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 PCDHB3Q9Y5E6 796 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 NFS1Q9Y697 457 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 PTPRQQ9UMZ3 2332 aa12.62□□□□□ -0.39
R3HDM1-213ENST00000463230 CTAGE15A4D2H0 777 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 ISM1B1AKI9 464 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 C8GP07360 202 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CTAGE8P0CG41 777 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 BDKRB1P46663 353 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 RHDQ02161 417 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 HP1BP3Q5SSJ5 553 aaPredicted RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CTAGE6Q86UF2 777 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CTAGE4Q8IX94 777 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 IL22RA1Q8N6P7 574 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 LMNTD1Q8N9Z9 388 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 LSM14AQ8ND56 463 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 POM121Q96HA1 1249 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 SPHK1Q9NYA1 384 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 ANKMY1Q9P2S6 941 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 SERTAD3Q9UJW9 196 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 PLAGL1Q9UM63 463 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 SPEGQ15772 3267 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 ARHGEF33A8MVX0 844 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 PRICKLE3O43900 615 aaPredicted RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CPNE3O75131 537 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 HBQ1P09105 142 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 FDXRP22570 491 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 PEBP1P30086 187 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 STAT5AP42229 794 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 PLTPP55058 493 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CXADRP78310 365 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 MRPS25P82663 173 aaKnown RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 NAB1Q13506 487 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CRTC2Q53ET0 693 aaPredicted RBP12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 ZDHHC24Q6UX98 284 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CYHR1Q6ZMK1 362 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 SMPDL3AQ92484 453 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 SLC30A3Q99726 388 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 ENAMQ9NRM1 1142 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 DMXL2Q8TDJ6 3036 aa12.61□□□□□ -0.39
R3HDM1-213ENST00000463230 TARM1B6A8C7 271 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 EFSO43281 561 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ZBTB14O43829 449 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 CCNDBP1O95273 360 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 CCNYL3P0C7X3 344 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 MC1RQ01726 317 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 TGIF1Q15583 401 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 HECTD2Q5U5R9 776 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ZC3HC1Q86WB0 502 aaKnown RBP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 CPNE9Q8IYJ1 553 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 FBXO25Q8TCJ0 367 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 ZUFSPQ96AP4 578 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 WBP1Q96G27 269 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 UBL7Q96S82 380 aaPredicted RBP12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 LRRC1Q9BTT6 524 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 RHOJQ9H4E5 214 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 POPDC3Q9HBV1 291 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 VWA7Q9Y334 891 aa12.6□□□□□ -0.39
R3HDM1-213ENST00000463230 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms