RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 C2orf80Q0P641 193 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 C15orf39Q6ZRI6 1047 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 Q6ZVU0 165 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 CYP2U1Q7Z449 544 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 FAM129CQ86XR2 697 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 SMPDL3AQ92484 453 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 MYDGFQ969H8 173 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 C7orf26Q96N11 449 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 MCCC2Q9HCC0 563 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PIGVQ9NUD9 493 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 TRAF6Q9Y4K3 522 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 HEPACAM2A8MVW5 462 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 PSMD11O00231 422 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 PIRO00625 290 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 KERAO60938 352 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SLC22A3O75751 556 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 MT-CYBP00156 380 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CBSLP0DN79 551 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CBSP35520 551 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TAS2R41P59536 307 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 OC90Q02509 493 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CHIT1Q13231 466 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 UPP1Q16831 310 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 PITRM1Q5JRX3 1037 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ZNF671Q8TAW3 534 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TEX47Q8TBZ9 253 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 MAPK15Q8TD08 544 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CYB5D2Q8WUJ1 264 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SPOCK2Q92563 424 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 RFT1Q96AA3 541 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 GAL3ST4Q96RP7 486 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 RIOK2Q9BVS4 552 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CACNG4Q9UBN1 327 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 RAB26Q9ULW5 256 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 N6AMT1Q9Y5N5 214 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 IGKV6-21A0A0C4DH24 114 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TCRBV21S2A2A0A5A6 115 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 IRGMA1A4Y4 181 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 XKRYO14609 159 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TGDSO95455 350 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SRPRAP08240 638 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TSPAN8P19075 237 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 NPR2P20594 1047 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CST5P28325 142 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CASP6P55212 293 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 RAB33AQ14088 237 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 UBAP2LQ14157 1087 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 FAM171BQ6P995 826 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 GCNT7Q6ZNI0 430 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 APOLD1Q96LR9 279 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 C12orf65Q9H3J6 166 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 IPPKQ9H8X2 491 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SPAG4Q9NPE6 437 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 BTRCQ9Y297 605 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 LYVE1Q9Y5Y7 322 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 EME2A4GXA9 379 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SUV39H1O43463 412 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SOCS5O75159 536 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ANXA4P09525 319 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 GIMD1P0DJR0 217 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CREB1P16220 341 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 NUDT1P36639 197 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 BEND5Q7L4P6 421 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 DNASE1L2Q92874 299 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ZDHHC12Q96GR4 267 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SMURF2Q9HAU4 748 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 AKAP8O43823 692 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TBX18O95935 607 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TNK2Q07912 1038 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 LCP2Q13094 533 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 PPM1JQ5JR12 505 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CLNKQ7Z7G1 428 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 CUZD1Q86UP6 607 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ZNF540Q8NDQ6 660 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 TRPV1Q8NER1 839 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 ZCCHC10Q8TBK6 192 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 MARK4Q96L34 752 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 PDLIM7Q9NR12 457 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 SDHAF3Q9NRP4 125 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 FBXW2Q9UKT8 454 aa10.51□□□□□ -0.73
AMBRA1-202ENST00000458649 FAM86C2PA6NEL3 165 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 H7C2Y5 167 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 CA3P07451 260 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 RBMS1P29558 406 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 GNG2P59768 71 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 SNTA1Q13424 505 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 SERINC3Q13530 473 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 ERN2Q76MJ5 926 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 LSM14AQ8ND56 463 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 PIGKQ92643 395 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 C17orf62Q9BQA9 187 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 ATG10Q9H0Y0 220 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 ABCG8Q9H221 673 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 SERINC1Q9NRX5 453 aa10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 THUMPD1Q9NXG2 353 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-202ENST00000458649 GDE1Q9NZC3 331 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms