RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 LPAR4Q99677 370 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC6A17Q9H1V8 727 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM39Q9HCM9 518 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPR160Q9UJ42 338 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 FBXO5Q9UKT4 447 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MAU2Q9Y6X3 613 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 RCCD1A6NED2 376 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 GOLGA8KD6RF30 607 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 H0Y8X5 98 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PSMD11O00231 422 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDC7O00311 574 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A9O60656 530 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ENTPD5O75356 428 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CIB2O75838 187 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A6P19224 532 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A4P22310 534 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A3P35503 534 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A5P35504 534 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 HDXQ7Z353 690 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 DCUN1D3Q8IWE4 304 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UMODL1-AS1Q8N2C9 162 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TBATAQ96M53 351 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TAAR9Q96RI9 348 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 REPIN1Q9BWE0 567 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A7Q9HAW7 530 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A10Q9HAW8 530 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UGT1A8Q9HAW9 530 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PARVBQ9HBI1 364 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CIDEBQ9UHD4 219 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MBD1Q9UIS9 605 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 SPEF1Q9Y4P9 236 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 COL24A1Q17RW2 1714 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 WDR91A4D1P6 747 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 EVPLLA8MZ36 301 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 H0Y3Z8 333 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CASQ2O14958 399 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PGLSO95336 258 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 NQO1P15559 274 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CRABP2P29373 138 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 HOXC8P31273 242 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 GP5P40197 560 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC7A2P52569 658 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 RPS14P62263 151 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 IRF2BP1Q8IU81 584 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TCAIMQ8N3R3 496 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRAM1L1Q8N609 369 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TTLQ8NG68 377 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 BIRC7Q96CA5 298 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 LENG8Q96PV6 779 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MYCBPQ99417 103 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 POLR3BQ9NW08 1133 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 QPCTLQ9NXS2 382 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 SEC14L3Q9UDX4 400 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CROCCQ5TZA2 2017 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 FIGNL2A6NMB9 653 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 STARD6P59095 220 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRPS15P82914 257 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CHRNA6Q15825 494 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TBCELQ5QJ74 424 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMEM201Q5SNT2 666 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MROH9Q5TGP6 573 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 BHLHB9Q6PI77 547 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 SPNS3Q6ZMD2 512 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MACC1Q6ZN28 852 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CDK20Q8IZL9 346 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 GSTCDQ8NEC7 633 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 DNAAF1Q8NEP3 725 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 MIPEPQ99797 713 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 WSB2Q9NYS7 404 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 H2AFY2Q9P0M6 372 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ARHGAP20Q9P2F6 1191 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ANKUB1A6NFN9 424 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM24O15164 1050 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 REM1O75628 298 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TCEA3O75764 348 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 RASAL1O95294 804 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ESR1P03372 595 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 GABRG2P18507 467 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 DOCK1Q14185 1865 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 CATSPEREQ5SY80 951 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 RAET1LQ5VY80 246 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 UNC5DQ6UXZ4 953 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMPRSS11BQ86T26 416 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZMIZ2Q8NF64 920 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 OR14L1PQ8NHC6 308 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF578Q96N58 590 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PPCSQ9HAB8 311 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRPV5Q9NQA5 729 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 DIABLOQ9NR28 239 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 ETNK2Q9NVF9 386 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRNAU1APQ9NX07 287 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 PLXNB2O15031 1838 aa5.5□□□□□ -1.53
CDC42BPA-209ENST00000448940 WNK3Q9BYP7 1800 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 PATE3B3GLJ2 98 aa5.49□□□□□ -1.53
CDC42BPA-209ENST00000448940 DNAJB5O75953 348 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms