RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 IKBKGQ9Y6K9 419 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 GFYI3L273 518 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 POLR1CO15160 346 aaPredicted RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 NVLO15381 856 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SLU7O95391 586 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 HIST1H2AGP0C0S8 130 aaPredicted RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 UGT2B7P16662 529 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 HIST1H2ADP20671 130 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC5A2P31639 672 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 TAS2R39P59534 338 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 HSD11B2P80365 405 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 ACY1Q03154 408 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SP140Q13342 867 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 GRB7Q14451 532 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 EFTUD2Q15029 972 aaKnown RBP eCLIP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 UAP1Q16222 522 aaPredicted RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 CCSMST1Q4G0I0 132 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 FBXO38Q6PIJ6 1188 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 CEACAM20Q6UY09 585 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 CLEC14AQ86T13 490 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 EIF1ADQ8N9N8 165 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 MRRFQ96E11 262 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC41A2Q96JW4 573 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 HIST1H2AHQ96KK5 128 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 TEFMQ96QE5 360 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 PKP4Q99569 1192 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 GPR22Q99680 433 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 HIST1H2AJQ99878 128 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 ZPBPQ9BS86 351 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 H2AFJQ9BTM1 129 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 DDA1Q9BW61 102 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 TRIM54Q9BYV2 358 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 ASPSCR1Q9BZE9 553 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 B3GNT4Q9C0J1 378 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 ACSS3Q9H6R3 686 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 POPDC3Q9HBV1 291 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 FBXO8Q9NRD0 319 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SPHK1Q9NYA1 384 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 SEMA5BQ9P283 1151 aa13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 MTO1Q9Y2Z2 717 aaKnown RBP13.56□□□□□ -0.24
GTF3C3-206ENST00000448539 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 A0A0J9YY10 115 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 CDRT15L2A8MXV6 281 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 MYO1CO00159 1063 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC16A5O15375 505 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 RRP8O43159 456 aaKnown RBP13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PRAMEF10O60809 474 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 STMN1P16949 149 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PMS2P54278 862 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 ARHGAP19Q14CB8 494 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC5A12Q1EHB4 618 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PROSER1Q86XN7 944 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 BMPERQ8N8U9 685 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 OR2A14Q96R47 310 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 MCMBPQ9BTE3 642 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 MENTQ9BUN1 341 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PITPNM3Q9BZ71 974 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 FANCEQ9HB96 536 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PARVBQ9HBI1 364 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PDE7BQ9NP56 450 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 PCDHGA3Q9Y5H0 932 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 NBEAQ8NFP9 2946 aa13.55□□□□□ -0.24
GTF3C3-206ENST00000448539 DSPP15924 2871 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 KRT87PA6NCN2 255 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 C9orf172C9J069 976 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 FAM155BO75949 473 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 C1QAP02745 245 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 INHBAP08476 426 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 EBLN1P0CF75 366 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CD82P27701 267 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 OAS2P29728 719 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 PGGT1BP53609 377 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 PNLIPRP1P54315 467 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 RAB10P61026 200 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SH3BP2P78314 561 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 TUBB3Q13509 450 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 ZNF460Q14592 562 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 IL11RAQ14626 422 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 KCNAB1Q14722 419 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 SF1Q15637 639 aaKnown RBP13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CYP2A13Q16696 494 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 LRRC69Q6ZNQ3 347 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 TRIM73Q86UV7 250 aa13.54□□□□□ -0.24
GTF3C3-206ENST00000448539 CEP97Q8IW35 865 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms