RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 TMEM209Q96SK2 561 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CYP2S1Q96SQ9 504 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 NPAS2Q99743 824 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 DERL2Q9GZP9 239 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 DPEP2Q9H4A9 486 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ANKHQ9HCJ1 492 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDK12-202ENST00000447079 WNK3Q9BYP7 1800 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 A0A0G2JPF8 293 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MTMR11A4FU01 709 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PRR5-ARHGAP8B1AHC4 643 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 HNRNPCL3B7ZW38 293 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 PLOD3O60568 738 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 HNRNPCL4P0DMR1 293 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SAGP10523 405 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 ITPKBP27987 946 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SEC13P55735 322 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ARHGAP8P85298 464 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PLEKHS1Q5SXH7 462 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 C6orf183Q5T699 404 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 LIX1Q8N485 282 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 TRPV1Q8NER1 839 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 C7orf43Q8WVR3 580 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CDCA3Q99618 268 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 C16orf70Q9BSU1 422 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CMTM6Q9NX76 183 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 GRHL1Q9NZI5 618 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MAT2BQ9NZL9 334 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PTGFRNQ9P2B2 879 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MAN2B2Q9Y2E5 1009 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PEX16Q9Y5Y5 336 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ATP6AP2A0A1C7CYW4 349 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 AXIN1O15169 862 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ATP6AP2O75787 350 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 TSPAN8P19075 237 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 OXTRP30559 389 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 GDI1P31150 447 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CDH13P55290 713 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CYP4F8P98187 520 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PIGWQ7Z7B1 504 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ADGRD2Q7Z7M1 963 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 RELL1Q8IUW5 271 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 HID1Q8IV36 788 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MCEMP1Q8IX19 187 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 FCGR1BQ92637 280 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CENPNQ96H22 339 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 NPY6RQ99463 290 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 FAM83CQ9BQN1 747 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 FANCFQ9NPI8 374 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SPATA7Q9P0W8 599 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PCDHGB1Q9Y5G3 927 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ARL5AQ9Y689 179 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 FAM159BA6NKW6 160 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 BCKDKO14874 412 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 AGXTP21549 392 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ZIK1Q3SY52 487 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 WDR45BQ5MNZ6 344 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SLC9B2Q86UD5 537 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 CIR1Q86X95 450 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 COX18Q8N8Q8 333 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ACAT2Q9BWD1 397 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MAP10Q9P2G4 905 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 BACE2Q9Y5Z0 518 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PRAMEF11O60813 436 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 GIMD1P0DJR0 217 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 NFKB2Q00653 900 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 IL18R1Q13478 541 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SLC39A4Q6P5W5 647 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 TIFABQ6ZNK6 161 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ZNF354BQ96LW1 612 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 TSSK3Q96PN8 268 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 IKZF4Q9H2S9 585 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PMF1-BGLAPU3KQ54 211 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 FAM240BA0A1B0GVZ2 78 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 LCHNA4D1U4 455 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 MASP1P48740 699 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PRAMEF14Q5SWL7 426 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 PRAMEF13Q5VWM6 474 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 NRSN1Q8IZ57 195 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 RBM15BQ8NDT2 890 aaKnown RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 LRRC3Q9BY71 257 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 SMPD3Q9NY59 655 aaPredicted RBP6.89□□□□□ -1.31
CDK12-202ENST00000447079 PCDHB11Q9Y5F2 797 aa6.89□□□□□ -1.31
CDK12-202ENST00000447079 TCRBV7S2A1N4TA0A589 114 aa6.88□□□□□ -1.31
CDK12-202ENST00000447079 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
CDK12-202ENST00000447079 STX16O14662 325 aa6.88□□□□□ -1.31
CDK12-202ENST00000447079 KCNJ13O60928 360 aa6.88□□□□□ -1.31
CDK12-202ENST00000447079 TRIM3O75382 744 aaPredicted RBP6.88□□□□□ -1.31
CDK12-202ENST00000447079 RPL17P18621 184 aaKnown RBP6.88□□□□□ -1.31
CDK12-202ENST00000447079 MLLT3P42568 568 aaPredicted RBP6.88□□□□□ -1.31
CDK12-202ENST00000447079 RPS14P62263 151 aaKnown RBP6.88□□□□□ -1.31
CDK12-202ENST00000447079 RPS21P63220 83 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms