RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 DNAJC11Q9NVH1 559 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 SLC25A37Q9NYZ2 338 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 SLC8A2Q9UPR5 921 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 DMTF1Q9Y222 760 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 TRIM64CA6NLI5 447 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 EI24O14681 340 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ERN1O75460 977 aaKnown RBP13.78□□□□□ -0.2
NCLP1-201ENST00000445357 LEFTY1O75610 366 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 SLCO2B1O94956 709 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 FTH1P02794 183 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 GSTM1P09488 218 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 SOX11P35716 441 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ALDH3B2P48448 385 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 GSTM4Q03013 218 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ZNF33BQ06732 778 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 LSAMPQ13449 338 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 KCNC3Q14003 757 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 PYCR3Q53H96 274 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 DPPA4Q7L190 304 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ASZ1Q8WWH4 475 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 ELMO1Q92556 727 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 LRIG1Q96JA1 1093 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 RNF145Q96MT1 663 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 HHIPQ96QV1 700 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 KCNH6Q9H252 994 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 IKZF5Q9H5V7 419 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 CLK4Q9HAZ1 481 aaKnown RBP13.78□□□□□ -0.2
NCLP1-201ENST00000445357 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 SMPD3Q9NY59 655 aaPredicted RBP13.78□□□□□ -0.2
NCLP1-201ENST00000445357 DKK3Q9UBP4 350 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
NCLP1-201ENST00000445357 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
NCLP1-201ENST00000445357 A0A096LPI6 279 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 AREL1O15033 823 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 CLOCKO15516 846 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PRAMEF4O60810 478 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 GMNNO75496 209 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 HOXB9P17482 250 aaPredicted RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 MAPK1P28482 360 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PLA2G4EQ3MJ16 856 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 FAM98BQ52LJ0 330 aaKnown RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 ARSIQ5FYB1 569 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PRAMEF9Q5VWM5 478 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 ATG9BQ674R7 924 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 NAIF1Q69YI7 327 aaPredicted RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 Q6ZVL8 140 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 FKBP9P1Q75LS8 142 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 ALDH16A1Q8IZ83 802 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 SKA2Q8WVK7 121 aaPredicted RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 TESCQ96BS2 214 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 FCRL1Q96LA6 429 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 VPS35Q96QK1 796 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 OSBPL6Q9BZF3 934 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PAIP1Q9H074 479 aaKnown RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 CAAP1Q9H8G2 361 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PTTG2Q9NZH5 202 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
NCLP1-201ENST00000445357 PRRC2BQ5JSZ5 2229 aaKnown RBP13.77□□□□□ -0.21
NCLP1-201ENST00000445357 FADS2P1A8MWK0 482 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 UGDHO60701 494 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 MTX2O75431 263 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 SCELO95171 688 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 CTSLP07711 333 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 GNAO1P09471 354 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 HNRNPA1P09651 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 JUPP14923 745 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 ETS2P15036 469 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 BMPR1AP36894 532 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 CAPGP40121 348 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 NNMTP40261 264 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 ETV3P41162 512 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 NRIP1P48552 1158 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 TECPR1Q7Z6L1 1165 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 KLHDC8AQ8IYD2 350 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 BEND7Q8N7W2 519 aaPredicted RBP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 MYLIPQ8WY64 445 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 UGT2B28Q9BY64 529 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 SERHLQ9NQF3 203 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 TUBA8Q9NY65 449 aaPredicted RBP13.76□□□□□ -0.21
NCLP1-201ENST00000445357 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
NCLP1-201ENST00000445357 SLC22A14Q9Y267 594 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms