RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 LYSTQ99698 3801 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 BACH2Q9BYV9 841 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
SSXP3-201ENST00000442971 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
SSXP3-201ENST00000442971 WDCPQ9H6R7 721 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 FAM60AQ9NP50 221 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 ST7Q9NRC1 585 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 IRAK4Q9NWZ3 460 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 ACSL5Q9ULC5 683 aa6.74□□□□□ -1.33
SSXP3-201ENST00000442971 CNOT6Q9ULM6 557 aaKnown RBP6.74□□□□□ -1.33
SSXP3-201ENST00000442971 M0QYV0 167 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 PFKFB2O60825 505 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 RGS9O75916 674 aaPredicted RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 MTHFD1P11586 935 aaKnown RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 GABRA1P14867 456 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF7P17097 686 aaPredicted RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF8P17098 575 aaPredicted RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 PRDX3P30048 256 aaKnown RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 CEACAM8P31997 349 aaPredicted RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 GABRB2P47870 512 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 BCL2L1Q07817 233 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 LGALS3BPQ08380 585 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 CRTC3Q6UUV7 619 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 SULF2Q8IWU5 870 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF611Q8N823 705 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 TNIP2Q8NFZ5 429 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 OR10H5Q8NGA6 315 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF418Q8TF45 676 aaPredicted RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 DLG3Q92796 817 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 MSI2Q96DH6 328 aaKnown RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 IMMP1LQ96LU5 166 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 AK8Q96MA6 479 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 NPAS2Q99743 824 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 CNPPD1Q9BV87 410 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 RBM24Q9BX46 236 aaKnown RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 PITPNM3Q9BZ71 974 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF700Q9H0M5 742 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 EPB41L4BQ9H329 900 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 THAP9Q9H5L6 903 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 UNKLQ9H9P5 680 aaKnown RBP6.73□□□□□ -1.33
SSXP3-201ENST00000442971 PANK4Q9NVE7 773 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF226Q9NYT6 803 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 JKAMPQ9P055 326 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ATXN10Q9UBB4 475 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 DNAI1Q9UI46 699 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 IKZF3Q9UKT9 509 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 ACAD8Q9UKU7 415 aa6.73□□□□□ -1.33
SSXP3-201ENST00000442971 LCE6AA0A183 80 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 MATN2O00339 956 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 TRAFD1O14545 582 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 SCAMP2O15127 329 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 KLRC4O43908 158 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 NDUFS7O75251 213 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 THBS1P07996 1170 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ZGLP1P0C6A0 271 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 CRYGSP22914 178 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 LOXP28300 417 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 FMO4P31512 558 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 LONP1P36776 959 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 CDKN1AP38936 164 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 GABRA4P48169 554 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 RPL34P49207 117 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF136P52737 540 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 SNRPFP62306 86 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 RPE65Q16518 533 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 BRMS1LQ5PSV4 323 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ACBD5Q5T8D3 534 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 WLSQ5T9L3 541 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 SHC4Q6S5L8 630 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 SRLQ86TD4 932 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 TSPAN33Q86UF1 283 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ZNF441Q8N8Z8 693 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ZFP62Q8NB50 900 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 STT3BQ8TCJ2 826 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 TFAP2BQ92481 460 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 MIEF2Q96C03 454 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 INTS4Q96HW7 963 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 MED15Q96RN5 788 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 RIOK2Q9BVS4 552 aaKnown RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 ASB8Q9H765 288 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 SH2D2AQ9NP31 389 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 PIGVQ9NUD9 493 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 GALNT8Q9NY28 637 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 KIAA1257Q9ULG3 409 aa6.72□□□□□ -1.33
SSXP3-201ENST00000442971 KLF13Q9Y2Y9 288 aaPredicted RBP6.72□□□□□ -1.33
SSXP3-201ENST00000442971 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.71□□□□□ -1.34
SSXP3-201ENST00000442971 MBD3L3A6NE82 208 aaPredicted RBP6.71□□□□□ -1.34
SSXP3-201ENST00000442971 NPIPB15A6NHN6 443 aaPredicted RBP6.71□□□□□ -1.34
SSXP3-201ENST00000442971 KMOO15229 486 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 SSX4O60224 188 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 RAMP2O60895 175 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 CYP2A6P11509 494 aaPredicted RBP6.71□□□□□ -1.34
SSXP3-201ENST00000442971 BMP2P12643 396 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 ACADSBP45954 432 aa6.71□□□□□ -1.34
SSXP3-201ENST00000442971 RGRP47804 291 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms