RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 OR8K5Q8NH50 307 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 FLVCR1-AS1Q8TAF5 88 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 PDLIM5Q96HC4 596 aaKnown RBP14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 VPS39Q96JC1 886 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 RBBP8Q99708 897 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 NRTNQ99748 197 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 POPDC3Q9HBV1 291 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 RUVBL2Q9Y230 463 aaKnown RBP14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 B3GALT1Q9Y5Z6 326 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 FRYQ5TBA9 3013 aa14.54□□□□□ -0.08
CSNK1E-210ENST00000442216 HEATR5BQ9P2D3 2071 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 A0A0J9YY10 115 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 ZNF839A8K0R7 811 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 CXorf49A8MYA2 514 aaPredicted RBP14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 ISM1B1AKI9 464 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 LIPCP11150 499 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 FGF5P12034 268 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 MAP4P27816 1152 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 ABCG1P45844 678 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 POU4F1Q01851 419 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 FOXM1Q08050 763 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 SLMAPQ14BN4 828 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 KBTBD12Q3ZCT8 623 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 CCSMST1Q4G0I0 132 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 EIF1ADQ8N9N8 165 aaKnown RBP14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 FBF1Q8TES7 1133 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 EEF1AKMT1Q8WVE0 214 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 KCNE4Q8WWG9 221 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 ANKRD7Q92527 254 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 ELMO2Q96JJ3 720 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 OR6C1Q96RD1 312 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 OLFM1Q99784 485 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 FUT8Q9BYC5 575 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 PDE7BQ9NP56 450 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 SPHK1Q9NYA1 384 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 FOXJ2Q9P0K8 574 aa14.53□□□□□ -0.08
CSNK1E-210ENST00000442216 AHCTF1Q8WYP5 2266 aa14.52□□□□□ -0.08
CSNK1E-210ENST00000442216 SLC9B1P1A6NJY1 282 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 STMND1H3BQB6 276 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PRICKLE3O43900 615 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TSPAN12O95859 305 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 ST6GAL1P15907 406 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 ZNF37AP17032 561 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 CYP2A7P20853 494 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 OAS2P29728 719 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PEBP1P30086 187 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SPRP35270 261 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TUBB4BP68371 445 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SH3BP2P78314 561 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 UBE2R2Q712K3 238 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PIWIL4Q7Z3Z4 852 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PPP1R3BQ86XI6 285 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 DTX1Q86Y01 620 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 CTAGE3PQ8IX95 158 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 NKAPQ8N5F7 415 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 MCOLN3Q8TDD5 553 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 DENND1AQ8TEH3 1009 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TSPAN17Q96FV3 270 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TCTN2Q96GX1 697 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PPM1MQ96MI6 270 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 IL17FQ96PD4 163 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 GPR22Q99680 433 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SLC12A9Q9BXP2 914 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SPRY4Q9C004 299 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 PARVBQ9HBI1 364 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 APMAPQ9HDC9 416 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 FGF21Q9NSA1 209 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SOHLH2Q9NX45 425 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 NINJ2Q9NZG7 142 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TSR3Q9UJK0 312 aaKnown RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 RARRES3Q9UL19 164 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 SSUH2Q9Y2M2 353 aa14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 TMEM184BQ9Y519 407 aaPredicted RBP14.52□□□□□ -0.09
CSNK1E-210ENST00000442216 ESPNB1AK53 854 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 RHOXF2BP0C7M4 288 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 EBLN1P0CF75 366 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 FOLR1P15328 257 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 SLC12A2P55011 1212 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 TAS2R39P59534 338 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 TUBB3Q13509 450 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 MAP7Q14244 749 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 NAA25Q14CX7 972 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 PPM1NQ8N819 430 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 C19orf47Q8N9M1 422 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 LMNTD1Q8N9Z9 388 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 SMPDL3AQ92484 453 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 PMEPA1Q969W9 287 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 ZNF501Q96CX3 271 aaPredicted RBP14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 LINGO1Q96FE5 620 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 CCDC138Q96M89 665 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 DCBLD2Q96PD2 775 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 CYTH2Q99418 400 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 PKP4Q99569 1192 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 RHOXF2Q9BQY4 288 aa14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 CDC42EP4Q9H3Q1 356 aaKnown RBP14.51□□□□□ -0.09
CSNK1E-210ENST00000442216 FANCEQ9HB96 536 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms