RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FOXJ2Q9P0K8 574 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 SPTA1P02549 2419 aa17.14■□□□□ 0.33
CCDC188-201ENST00000439765 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 KRT87PA6NCN2 255 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 TLCD2A6NGC4 264 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 C9orf172C9J069 976 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 POC1B-GALNT4F8VUJ3 575 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 BTN3A3O00478 584 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 GABRB3P28472 473 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 KPNA2P52292 529 aaKnown RBP17.13■□□□□ 0.33
CCDC188-201ENST00000439765 IFFO1Q0D2I5 559 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 ACSBG2Q5FVE4 666 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 RBM20Q5T481 1227 aaKnown RBP17.13■□□□□ 0.33
CCDC188-201ENST00000439765 UNC5DQ6UXZ4 953 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 SLC44A1Q8WWI5 657 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 PPM1MQ96MI6 270 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 GPR21Q99679 349 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 CPNE1Q99829 537 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 CTRCQ99895 268 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 AARSD1Q9BTE6 412 aaKnown RBP17.13■□□□□ 0.33
CCDC188-201ENST00000439765 ROPN1BQ9BZX4 212 aaPredicted RBP17.13■□□□□ 0.33
CCDC188-201ENST00000439765 B3GNT4Q9C0J1 378 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 ROPN1Q9HAT0 212 aaPredicted RBP17.13■□□□□ 0.33
CCDC188-201ENST00000439765 SLC39A1Q9NY26 324 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 POLG2Q9UHN1 485 aa17.13■□□□□ 0.33
CCDC188-201ENST00000439765 TOX3O15405 576 aaPredicted RBP17.12■□□□□ 0.33
CCDC188-201ENST00000439765 AHSGP02765 367 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 PRB1P04280 392 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 RPN2P04844 631 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TPBGLP0DKB5 382 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 GCAP28676 217 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 SHMT2P34897 504 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 MSH2P43246 934 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 SH3BP2P78314 561 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 C19orf57Q0VDD7 668 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 GBX1Q14549 363 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TTLL9Q3SXZ7 439 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 ANKS6Q68DC2 871 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 LRIG3Q6UXM1 1119 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 STRA8Q7Z7C7 330 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 GALNT7Q86SF2 657 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TTC9Q92623 222 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 MRRFQ96E11 262 aaKnown RBP17.12■□□□□ 0.33
CCDC188-201ENST00000439765 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
CCDC188-201ENST00000439765 CD180Q99467 661 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 DHRS4Q9BTZ2 278 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TMEM109Q9BVC6 243 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 PPCSQ9HAB8 311 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 APMAPQ9HDC9 416 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 SIDT1Q9NXL6 827 aaKnown RBP17.12■□□□□ 0.33
CCDC188-201ENST00000439765 POMT2Q9UKY4 750 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 PSAT1Q9Y617 370 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 COMMD10Q9Y6G5 202 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TLN1Q9Y490 2541 aaKnown RBP17.12■□□□□ 0.33
CCDC188-201ENST00000439765 ANKRD12Q6UB98 2062 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 MAP2K7O14733 419 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 VPS26AO75436 327 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 LIPCP11150 499 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 GP5P40197 560 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 FOXM1Q08050 763 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 CCDC81Q6ZN84 652 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TAX1BP1Q86VP1 789 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 ADGRF3Q8IZF5 1079 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 CD200R1Q8TD46 325 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 RNF31Q96EP0 1072 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 VIPAS39Q9H9C1 493 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 WDR70Q9NW82 654 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 ZNF446Q9NWS9 450 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 B3GALT1Q9Y5Z6 326 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
CCDC188-201ENST00000439765 B4E171 279 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 MATN2O00339 956 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 FAM155BO75949 473 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 INHBAP08476 426 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 CDH3P22223 829 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 ATP5DP30049 168 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 TSPAN7P41732 249 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 KCNAB1Q14722 419 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 ADGRD1Q6QNK2 874 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 TDRPQ86YL5 185 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 GPATCH11Q8N954 259 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 LMNTD1Q8N9Z9 388 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 DCAKDQ8WVC6 231 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 IL17FQ96PD4 163 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 TAAR9Q96RI9 348 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 MCMBPQ9BTE3 642 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 LATS2Q9NRM7 1088 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 SPHK1Q9NYA1 384 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 ACTR10Q9NZ32 417 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 TRMT6Q9UJA5 497 aaKnown RBP17.11■□□□□ 0.33
CCDC188-201ENST00000439765 ZNF180Q9UJW8 692 aa17.11■□□□□ 0.33
CCDC188-201ENST00000439765 PIPSLA2A3N6 862 aa17.1■□□□□ 0.33
CCDC188-201ENST00000439765 C2orf74A8MZ97 194 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms