RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 ARL15Q9NXU5 204 aa9.74□□□□□ -0.85
CBX5-202ENST00000439541 MARCOQ9UEW3 520 aaPredicted RBP9.74□□□□□ -0.85
CBX5-202ENST00000439541 APOBEC3BQ9UH17 382 aaKnown RBP9.74□□□□□ -0.85
CBX5-202ENST00000439541 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
CBX5-202ENST00000439541 ASF1AQ9Y294 204 aa9.74□□□□□ -0.85
CBX5-202ENST00000439541 DNMT3AQ9Y6K1 912 aaPredicted RBP9.74□□□□□ -0.85
CBX5-202ENST00000439541 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
CBX5-202ENST00000439541 SPAG17Q6Q759 2223 aa9.74□□□□□ -0.85
CBX5-202ENST00000439541 ZFC3H1O60293 1989 aaKnown RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 SDK1Q7Z5N4 2213 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 A0A1B0GVT2 93 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 PPP6CO00743 305 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 TOR1BO14657 336 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 TAPBPO15533 448 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 KLK8O60259 260 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 SDC3O75056 442 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 C1orf105O95561 183 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 CATP04040 527 aaKnown RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 S100BP04271 92 aaPredicted RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 JUNDP17535 347 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 CYP2A7P20853 494 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 GDF5P43026 501 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 HSPA7P48741 367 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 RPIAP49247 311 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 AQP5P55064 265 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 CDH13P55290 713 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 NXPH1P58417 271 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 AP2B1P63010 937 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 HERVK_113P63132 956 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 RPA4Q13156 261 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 PRKG2Q13237 762 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 UNC50Q53HI1 259 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 ZNF678Q5SXM1 525 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 CEP68Q76N32 757 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 SCUBE1Q8IWY4 988 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 PATE1Q8WXA2 126 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 TFGQ92734 400 aaPredicted RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 NELL1Q92832 810 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 C12orf66Q96MD2 445 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 IL17FQ96PD4 163 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 INSM2Q96T92 566 aaPredicted RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 SORT1Q99523 831 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 ERVK-6Q9BXR3 956 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 GSTO2Q9H4Y5 243 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 TNFRSF12AQ9NP84 129 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 WWOXQ9NZC7 414 aa9.73□□□□□ -0.85
CBX5-202ENST00000439541 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
CBX5-202ENST00000439541 TRBV23OR9-2A0A075B6M9 112 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 A0A1B0GTL3 188 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 FKBP6O75344 327 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 KRT36O76013 467 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 SUPT7LO94864 414 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 TNFP01375 233 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 RPS17P08708 135 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 ENO2P09104 434 aaPredicted RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 GRK2P25098 689 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 MPSTP25325 297 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 MAP4P27816 1152 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 SLC1A6P48664 564 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 AFF3P51826 1226 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 ALDH18A1P54886 795 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 SESN3P58005 492 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 DNAJB13P59910 316 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 ABCE1P61221 599 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 BNC1Q01954 994 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 SLC22A9Q8IVM8 553 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 LSMEM2Q8N112 164 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 DCBLD1Q8N8Z6 715 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 PIWIL2Q8TC59 973 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 PPP4R1Q8TF05 950 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 JPH3Q8WXH2 748 aaPredicted RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 PIGKQ92643 395 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 PYCR2Q96C36 320 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 RHBDF1Q96CC6 855 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 L3HYPDHQ96EM0 354 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 RILPQ96NA2 401 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 FOPNLQ96NB1 174 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 PKP4Q99569 1192 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 COL25A1Q9BXS0 654 aaPredicted RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 ATG10Q9H0Y0 220 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 RDH14Q9HBH5 336 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 TRNAU1APQ9NX07 287 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 ARMCX1Q9P291 453 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 PCTPQ9UKL6 214 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 TDRKHQ9Y2W6 561 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 ANKRD12Q6UB98 2062 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 A6NCN8 305 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 TMEM233B4DJY2 109 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 IFRD1O00458 451 aaPredicted RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 E2F3O00716 465 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 UBFD1O14562 309 aaKnown RBP9.72□□□□□ -0.85
CBX5-202ENST00000439541 VILLO15195 856 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 SLC16A5O15375 505 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 HSPA4LO95757 839 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 SLC16A8O95907 504 aa9.72□□□□□ -0.85
CBX5-202ENST00000439541 ENO1P06733 434 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms