RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 DNAAF2Q9NVR5 837 aaKnown RBP11.83□□□□□ -0.52
NEK1-201ENST00000439128 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
NEK1-201ENST00000439128 UTS2RQ9UKP6 389 aa11.83□□□□□ -0.52
NEK1-201ENST00000439128 OR1A2Q9Y585 309 aa11.83□□□□□ -0.52
NEK1-201ENST00000439128 DNAJC25-GNG10A0A024R161 153 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 A0A1B0GW55 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 HYKKA2RU49 373 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 RIIAD1A6NNX1 92 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 HCN1O60741 890 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ITGB1P05556 798 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 GK5Q6ZS86 529 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PIM3Q86V86 326 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DEPDC4Q8N2C3 294 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 CPSF7Q8N684 471 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 CDK15Q96Q40 435 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 FUT8Q9BYC5 575 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 WDR55Q9H6Y2 383 aaPredicted RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 C1orf109Q9NX04 203 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 B4GALT7Q9UBV7 327 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DUX4Q9UBX2 424 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 MED31Q9Y3C7 131 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 OAS1P00973 400 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 C8orf89P0DMQ9 161 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ITGA1P56199 1179 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TDGQ13569 410 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PTCHD4Q6ZW05 846 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ZNF761Q86XN6 746 aaPredicted RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 CCDC103Q8IW40 242 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 OR9A1PQ8NGU1 263 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PTCD3Q96EY7 689 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 SLC17A7Q9P2U7 560 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 COPG2Q9UBF2 871 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 SAMD4AQ9UPU9 718 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 ZNF860A6NHJ4 632 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 CRHR1P34998 444 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 DNASE1L1P49184 302 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 RPL26P61254 145 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 HHEXQ03014 270 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PTP4A2Q12974 167 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 NPY5RQ15761 445 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 AP1ARQ63HQ0 302 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ZFP1Q6P2D0 407 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ERICH5Q6P6B1 374 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TCEAL8Q8IYN2 117 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 APCDD1Q8J025 514 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 C8orf59Q8N0T1 100 aaPredicted RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 AENQ8WTP8 325 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 PTCHD1Q96NR3 888 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 NPAS2Q99743 824 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 C6orf62Q9GZU0 229 aaPredicted RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 CRISPLD1Q9H336 500 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PRTFDC1Q9NRG1 225 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 SCML1Q9UN30 329 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 RPL26L1Q9UNX3 145 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 NUMBLQ9Y6R0 609 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TRIM24O15164 1050 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 BEST1O76090 585 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 LYNP07948 512 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 LINGO3P0C6S8 592 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 IL1R2P27930 398 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 INCA1Q0VD86 236 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PDZK1Q5T2W1 519 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PROSER1Q86XN7 944 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TRPV3Q8NET8 790 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 EEF1AKMT1Q8WVE0 214 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 SLC38A4Q969I6 547 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TP53INP1Q96A56 240 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 TBC1D23Q9NUY8 699 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 CKLFQ9UBR5 152 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 A0A1W2PRB8 838 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 FAM234BA2RU67 622 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 OAZ2O95190 189 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 CBSLP0DN79 551 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 PRPS2P11908 318 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 C6P13671 934 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 HNRNPA2B1P22626 353 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 CBSP35520 551 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 OMPP47874 163 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 BNIP2Q12982 314 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 GPRIN1Q7Z2K8 1008 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 MRPL10Q7Z7H8 261 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 PIGXQ8TBF5 258 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 SLC5A11Q8WWX8 675 aa11.82□□□□□ -0.52
NEK1-201ENST00000439128 ZCCHC3Q9NUD5 404 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 MRPL39Q9NYK5 338 aaKnown RBP11.82□□□□□ -0.52
NEK1-201ENST00000439128 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 RBM47A0AV96 593 aaKnown RBP11.81□□□□□ -0.52
NEK1-201ENST00000439128 DUXAA6NLW8 204 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 MAGEB17A8MXT2 336 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 SOCS5O75159 536 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 BPGMP07738 259 aa11.81□□□□□ -0.52
NEK1-201ENST00000439128 CYP4B1P13584 511 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms