RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 SMARCAL1Q9NZC9 954 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 IFT80Q9P2H3 777 aaPredicted RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 DHCR7Q9UBM7 475 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PLAGL1Q9UM63 463 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 SLC5A6Q9Y289 635 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PCDHA13Q9Y5I0 950 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PRSS21Q9Y6M0 314 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 AP1M2Q9Y6Q5 423 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 SPENQ96T58 3664 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 MACROD2A1Z1Q3 448 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CCDC78A2IDD5 438 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PJA2O43164 708 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 METTL18O95568 372 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 ALPPP05187 535 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 RBP3P10745 1247 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CTNNA2P26232 953 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 ACADLP28330 430 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CTNNA1P35221 906 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 GLRBP48167 497 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CACNG1Q06432 222 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 DBN1Q16643 649 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 RHBDD2Q6NTF9 364 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 AADACL2Q6P093 401 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CUZD1Q86UP6 607 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CNGA4Q8IV77 575 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 ZADH2Q8N4Q0 377 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 LMNTD1Q8N9Z9 388 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CLEC1AQ8NC01 280 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 OR2Y1Q8NGV0 311 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 ELMO1Q92556 727 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PTERQ96BW5 349 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 CDKN2AIPNLQ96HQ2 116 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 SPATA13Q96N96 652 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 BARD1Q99728 777 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 C19orf43Q9BQ61 176 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 C17orf62Q9BQA9 187 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 FERMT1Q9BQL6 677 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 OSBPL8Q9BZF1 889 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 VPS37BQ9H9H4 285 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 TPSG1Q9NRR2 321 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 SLC22A11Q9NSA0 550 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PIH1D1Q9NWS0 290 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 NDOR1Q9UHB4 597 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 FEZ2Q9UHY8 353 aaPredicted RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 NTNG1Q9Y2I2 539 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 KLHL20Q9Y2M5 609 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 TDRKHQ9Y2W6 561 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 PCDHA3Q9Y5H8 950 aa4.26□□□□□ -1.73
LINC01239-202ENST00000436786 COPG1Q9Y678 874 aaKnown RBP4.26□□□□□ -1.73
LINC01239-202ENST00000436786 UNC79Q9P2D8 2635 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 NBASA2RRP1 2371 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 A0A0J9YY10 115 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 CCDC162PA2VCL2 907 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 MROH6A6NGR9 719 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 OR51F1A6NGY5 319 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ISM1B1AKI9 464 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 H7C0S8 307 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 LIN7AO14910 233 aaPredicted RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ZSCAN9O15535 394 aaPredicted RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ALOX12BO75342 701 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 IPO13O94829 963 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 AP2A2O94973 939 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 IGHEP01854 428 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 CD63P08962 238 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 GSTM1P09488 218 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ITGAXP20702 1163 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ALAS2P22557 587 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 PEBP1P30086 187 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 PTPN7P35236 360 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 CSE1LP55060 971 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 SOX8P57073 446 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 GSTM4Q03013 218 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ELOAQ14241 798 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 POU6F1Q14863 301 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 HIF1AQ16665 826 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 CYP2A13Q16696 494 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 PARP6Q2NL67 630 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 NKAIN1Q4KMZ8 207 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 KCTD11Q693B1 232 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 TLDC1Q6P9B6 456 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 RIPOR1Q6ZS17 1223 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 Q6ZS92 163 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ARHGEF18Q6ZSZ5 1173 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 MCATQ8IVS2 390 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 KLHDC8BQ8IXV7 354 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 TAB3Q8N5C8 712 aaPredicted RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 TC2NQ8N9U0 490 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 FAM71DQ8N9W8 422 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 PROKR1Q8TCW9 393 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 ALG3Q92685 438 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 GTPBP3Q969Y2 492 aaKnown RBP4.25□□□□□ -1.73
LINC01239-202ENST00000436786 C5orf34Q96MH7 638 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 PPP1R2P1Q96PQ5 205 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 NDC1Q9BTX1 674 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 AP1M1Q9BXS5 423 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 CHRNA10Q9GZZ6 450 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 TXLNGQ9NUQ3 528 aa4.25□□□□□ -1.73
LINC01239-202ENST00000436786 IRAK4Q9NWZ3 460 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms