RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
HOXC4-202ENST00000430889 C8orf4Q9NR00 106 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 DNAJC11Q9NVH1 559 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 ZNHIT2Q9UHR6 403 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 SNX6Q9UNH7 406 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 KRT87PA6NCN2 255 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 ARHGEF33A8MVX0 844 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PSMD11O00231 422 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 QSOX1O00391 747 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 SEC22BO75396 215 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PRSS23O95084 383 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 RASAL1O95294 804 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 SOD1P00441 154 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PGRP06401 933 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 HIST1H2AGP0C0S8 130 aaPredicted RBP13.59□□□□□ -0.23
HOXC4-202ENST00000430889 C7P10643 843 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PRPS2P11908 318 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PCSK2P16519 638 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 HIST1H2ADP20671 130 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 NFKBIAP25963 317 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PTPN6P29350 595 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 NNMTP40261 264 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 CTSCP53634 463 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 RUNDC3AQ59EK9 446 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 LDLRAP1Q5SW96 308 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 LRIF1Q5T3J3 769 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 NLRP8Q86W28 1048 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
HOXC4-202ENST00000430889 BEND7Q8N7W2 519 aaPredicted RBP13.59□□□□□ -0.23
HOXC4-202ENST00000430889 RASGEF1AQ8N9B8 481 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 OR52E4Q8NGH9 312 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 MCOLN3Q8TDD5 553 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 ELMO1Q92556 727 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 HIST1H2AHQ96KK5 128 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 HIST1H2AJQ99878 128 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 H2AFJQ9BTM1 129 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
HOXC4-202ENST00000430889 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 SERHLQ9NQF3 203 aa13.59□□□□□ -0.23
HOXC4-202ENST00000430889 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 FAM149AA5PLN7 773 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 PLOD2O00469 737 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 NPC1O15118 1278 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 UGDHO60701 494 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 FESP07332 822 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 CDH1P12830 882 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 JUPP14923 745 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 CD22P20273 847 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 GZMMP51124 257 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF33BQ06732 778 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 E2F2Q14209 437 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 PYCR3Q53H96 274 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 GLYATQ6IB77 296 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 CALHM3Q86XJ0 350 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 SELENOMQ8WWX9 145 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 NXPE3Q969Y0 559 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 TESCQ96BS2 214 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 PYCR2Q96C36 320 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 MAGEB10Q96LZ2 347 aaPredicted RBP13.58□□□□□ -0.24
HOXC4-202ENST00000430889 C9orf16Q9BUW7 83 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 GORASP2Q9H8Y8 452 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 SLC22A14Q9Y267 594 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
HOXC4-202ENST00000430889 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 H0Y858 1186 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 UPK1AO00322 258 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 TSPAN6O43657 245 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 LILRB5O75023 590 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 TULP3O75386 442 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 RB1P06400 928 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 AMD1P17707 334 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 SDC1P18827 310 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
HOXC4-202ENST00000430889 METAP1P53582 386 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 POLE2P56282 527 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 CYP4F3Q08477 520 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 GRIN2CQ14957 1233 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 MAPKAPK3Q16644 382 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF284Q2VY69 593 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 CNPY1Q3B7I2 92 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 TMTC4Q5T4D3 741 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 LIPJQ5W064 366 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 AADATQ8N5Z0 425 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 METTL25Q8N6Q8 603 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 DNAJB8Q8NHS0 232 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 WDR20Q8TBZ3 569 aa13.57□□□□□ -0.24
HOXC4-202ENST00000430889 MTFMTQ96DP5 389 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms