RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 MARVELD2Q8N4S9 558 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 STT3BQ8TCJ2 826 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 HM13Q8TCT9 377 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 IMP4Q96G21 291 aaKnown RBP13.72□□□□□ -0.21
PDE6D-203ENST00000428104 LINC00615Q96LM1 132 aaPredicted RBP13.72□□□□□ -0.21
PDE6D-203ENST00000428104 POLDIP3Q9BY77 421 aaKnown RBP13.72□□□□□ -0.21
PDE6D-203ENST00000428104 HES7Q9BYE0 225 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 MVB12BQ9H7P6 319 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 KLHL1Q9NR64 748 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 CUTCQ9NTM9 273 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 KLHL20Q9Y2M5 609 aa13.72□□□□□ -0.21
PDE6D-203ENST00000428104 INTS1Q8N201 2190 aaKnown RBP13.71□□□□□ -0.21
PDE6D-203ENST00000428104 PRRG2O14669 202 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 ASNA1O43681 348 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 CTAG2O75638 210 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 NDST3O95803 873 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 CHRM5P08912 532 aaPredicted RBP13.71□□□□□ -0.21
PDE6D-203ENST00000428104 PYGMP11217 842 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 PCSK6P29122 969 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 FANCCQ00597 558 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
PDE6D-203ENST00000428104 ITGA9Q13797 1035 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
PDE6D-203ENST00000428104 MLKLQ8NB16 471 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 LILRB4Q8NHJ6 448 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 DTX3LQ8TDB6 740 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 TADA1Q96BN2 335 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 KCNJ16Q9NPI9 418 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 STMN3Q9NZ72 180 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 IL17CQ9P0M4 197 aa13.71□□□□□ -0.21
PDE6D-203ENST00000428104 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 TTI1O43156 1089 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 PDHA2P29803 388 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 ST13P50502 369 aaKnown RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 IFI35P80217 286 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 SLC10A2Q12908 348 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 BOP1Q14137 746 aaKnown RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 DPYSL3Q14195 570 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 RIPOR1Q6ZS17 1223 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 LAPTM4BQ86VI4 370 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 EID3Q8N140 333 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 RMND5BQ96G75 393 aaPredicted RBP13.7□□□□□ -0.22
PDE6D-203ENST00000428104 FRMD6Q96NE9 622 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 SYT11Q9BT88 431 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 COG4Q9H9E3 785 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 LRFN1Q9P244 771 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 ASB1Q9Y576 335 aa13.7□□□□□ -0.22
PDE6D-203ENST00000428104 IGHV1-45A0A0A0MS14 117 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 FAM237BA0A1B0GVD1 139 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 MX2P20592 715 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 MAGP20916 626 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 PEBP1P30086 187 aaKnown RBP13.69□□□□□ -0.22
PDE6D-203ENST00000428104 CHRNB4P30926 498 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 OCA2Q04671 838 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 PTPRCAPQ14761 206 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 OR5AR1Q8NGP9 310 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 ZNF398Q8TD17 642 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 DENND1AQ8TEH3 1009 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 ASB5Q8WWX0 329 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 TFGQ92734 400 aaPredicted RBP13.69□□□□□ -0.22
PDE6D-203ENST00000428104 PWWP2AQ96N64 755 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 SIGLEC12Q96PQ1 595 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
PDE6D-203ENST00000428104 GPATCH1Q9BRR8 931 aaKnown RBP13.69□□□□□ -0.22
PDE6D-203ENST00000428104 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 UBP1Q9NZI7 540 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDE6D-203ENST00000428104 RNF6Q9Y252 685 aa13.69□□□□□ -0.22
PDE6D-203ENST00000428104 ASPDHA6ND91 283 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 MED26O95402 600 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 LY6G6DO95868 133 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
PDE6D-203ENST00000428104 EEF1GP26641 437 aaKnown RBP13.68□□□□□ -0.22
PDE6D-203ENST00000428104 SHMT2P34897 504 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 ARSEP51690 589 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 CCDC71Q8IV32 467 aaPredicted RBP13.68□□□□□ -0.22
PDE6D-203ENST00000428104 NEK11Q8NG66 645 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 FAM71BQ8TC56 605 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
PDE6D-203ENST00000428104 TRABDQ9H4I3 376 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 SCINQ9Y6U3 715 aa13.68□□□□□ -0.22
PDE6D-203ENST00000428104 A0A1W2PQ72 361 aa13.67□□□□□ -0.22
PDE6D-203ENST00000428104 A8MUI8 341 aa13.67□□□□□ -0.22
PDE6D-203ENST00000428104 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms