RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LIN7AO14910 233 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 CST8O60676 142 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ANXA9O76027 345 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 USP1O94782 785 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 UNC5CO95185 931 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 SERPINC1P01008 464 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 TMEM253P0C7T8 217 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ACRV1P26436 265 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 PEBP1P30086 187 aaKnown RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 SOX11P35716 441 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 CDKN1CP49918 316 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ZNF140P52738 457 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 GEMP55040 296 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 FANCCQ00597 558 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 SLC18A3Q16572 532 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ATG9BQ674R7 924 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 SHISA6Q6ZSJ9 500 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 OR5K2Q8NHB8 316 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 P3H4Q92791 437 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 IQCDQ96DY2 449 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 FICDQ9BVA6 458 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 CUTCQ9NTM9 273 aa16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 LUC7L2Q9Y383 392 aaKnown RBP16.03■□□□□ 0.16
CHCHD3-202ENST00000423635 KCNN4O15554 427 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 PRICKLE3O43900 615 aaPredicted RBP16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 AP2A1O95782 977 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 MST1P26927 711 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 SERPINA9Q86WD7 417 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 FAM20CQ8IXL6 584 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 KBTBD2Q8IY47 623 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 CLDN19Q8N6F1 224 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 C14orf79Q96F83 325 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 ZNF285Q96NJ3 590 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 ZNF160Q9HCG1 818 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 PLA2G3Q9NZ20 509 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 CTSFQ9UBX1 484 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 SEC14L3Q9UDX4 400 aa16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 TDRKHQ9Y2W6 561 aaKnown RBP16.02■□□□□ 0.16
CHCHD3-202ENST00000423635 SNRNP200O75643 2136 aaKnown RBP16.02■□□□□ 0.15
CHCHD3-202ENST00000423635 PCNX1Q96RV3 2341 aa16.02■□□□□ 0.15
CHCHD3-202ENST00000423635 FITM1A5D6W6 292 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 HACD1B0YJ81 288 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 H7C0S8 307 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 KDM1AO60341 852 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 AP2A2O94973 939 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 CRYABP02511 175 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 MAGP20916 626 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 FDXRP22570 491 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 MC4RP32245 332 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 SLC1A1P43005 524 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 KRTAP10-9P60411 292 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 GRM7Q14831 915 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 ASTE1Q2TB18 679 aaPredicted RBP16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 ZC3H12BQ5HYM0 836 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 TCTE1Q5JU00 501 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 POM121Q96HA1 1249 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 QKIQ96PU8 341 aaKnown RBP eCLIP16.01■□□□□ 0.151e-7■■■■■ 32.3
CHCHD3-202ENST00000423635 MESP1Q9BRJ9 268 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 GBA3Q9H227 469 aa16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
CHCHD3-202ENST00000423635 BHMG1C9JSJ3 638 aaPredicted RBP16■□□□□ 0.15
CHCHD3-202ENST00000423635 PRR35P0CG20 571 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 ACPPP15309 386 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 OR1D4P47884 311 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 ADORA2A-AS1P86434 159 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 RBPJQ06330 500 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 KLC1Q07866 573 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 FAM214AQ32MH5 1076 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 NDUFAF7Q7L592 441 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 APOL2Q9BQE5 337 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 CRB3Q9BUF7 120 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 PTGFRNQ9P2B2 879 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 KLHL20Q9Y2M5 609 aa16■□□□□ 0.15
CHCHD3-202ENST00000423635 AAR2Q9Y312 384 aaKnown RBP16■□□□□ 0.15
CHCHD3-202ENST00000423635 MRPS2Q9Y399 296 aaKnown RBP16■□□□□ 0.15
CHCHD3-202ENST00000423635 NCOA6Q14686 2063 aaPredicted RBP15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 A0A1W2PQ72 361 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 SLC5A10A0PJK1 596 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 C19orf84I3L1E1 186 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 MAP2K7O14733 419 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 RASAL1O95294 804 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 MCM3P25205 808 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 KIR3DL1P43629 444 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 PLOD1Q02809 727 aaPredicted RBP15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 OLIG2Q13516 323 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 KAZNQ674X7 775 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 DENND5AQ6IQ26 1287 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 TMTC1Q8IUR5 882 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 STT3BQ8TCJ2 826 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 BRIX1Q8TDN6 353 aaKnown RBP15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 SLC22A18Q96BI1 424 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 MENTQ9BUN1 341 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 RNF32Q9H0A6 362 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 ARNT2Q9HBZ2 717 aa15.99■□□□□ 0.15
CHCHD3-202ENST00000423635 PLAGL1Q9UM63 463 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms