RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 H7C0S8 307 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 FFAR3O14843 346 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 LIN7AO14910 233 aaPredicted RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 GPR42O15529 346 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 AP2A2O94973 939 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 AP2A1O95782 977 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 F10P00742 488 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 TPM1P09493 284 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 SPTBP11277 2137 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 MMP11P24347 488 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 PSMB5P28074 263 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 GRNP28799 593 aaKnown RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 PKLRP30613 574 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 CCR7P32248 378 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 FOXN2P32314 431 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 CTNNA1P35221 906 aaKnown RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 GRIA1P42261 906 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 KCNK10P57789 538 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 YBX1P67809 324 aaKnown RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 CDC16Q13042 620 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 AIMP2Q13155 320 aaKnown RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 SEMA3AQ14563 771 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 KCTD19Q17RG1 926 aaPredicted RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 SLC5A12Q1EHB4 618 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 CCSMST1Q4G0I0 132 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 SYTL3Q4VX76 610 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 FRMPD2BQ6IN97 320 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 C11orf63Q6NUN7 778 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 TLDC1Q6P9B6 456 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 IGFL2Q6UWQ7 119 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 ARHGEF18Q6ZSZ5 1173 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 PRUNE1Q86TP1 453 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 LDB1Q86U70 411 aaPredicted RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 FJX1Q86VR8 437 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 SPNS2Q8IVW8 549 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 KLHDC8BQ8IXV7 354 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 KRT222Q8N1A0 295 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 TC2NQ8N9U0 490 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 OR52K1Q8NGK4 314 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 OR5K2Q8NHB8 316 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 STYXQ8WUJ0 223 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 MARVELD3Q96A59 401 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 C8orf44Q96CB5 159 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 THOC3Q96J01 351 aaKnown RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 ZNF778Q96MU6 729 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 C17orf62Q9BQA9 187 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 VPS37BQ9H9H4 285 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 AGPAT4Q9NRZ5 378 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 OR6C2Q9NZP2 312 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 POLG2Q9UHN1 485 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 PACSIN2Q9UNF0 486 aaPredicted RBP7.77□□□□□ -1.17
VIM-202ENST00000421459 SRPK3Q9UPE1 567 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.77□□□□□ -1.17
VIM-202ENST00000421459 CROCCQ5TZA2 2017 aa7.77□□□□□ -1.17
VIM-202ENST00000421459 ESPL1Q14674 2120 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 LOC105369274A0A096LPK9 316 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 LOC102723532A0A0G2JNH3 316 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 A0A0U1RQJ8 604 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 A0A1B0GX78 115 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 MROH6A6NGR9 719 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 CTSVO60911 334 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 IPO13O94829 963 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 GOT2P00505 430 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 IGHEP01854 428 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 FTH1P02794 183 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 CELA2AP08217 269 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 NSG1P42857 185 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ST13P50502 369 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 VSX2P58304 361 aaPredicted RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 COPS2P61201 443 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 HSPA14Q0VDF9 509 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ZNF169Q14929 603 aaPredicted RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 KIR2DS3Q14952 304 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ZRSR2Q15696 482 aaKnown RBP7.76□□□□□ -1.17
VIM-202ENST00000421459 PARP6Q2NL67 630 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 AGAP7PQ5VUJ5 663 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 FIGLAQ6QHK4 219 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ZNF534Q76KX8 674 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 LAPTM4BQ86VI4 370 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 TMTC1Q8IUR5 882 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 OR4N4Q8N0Y3 316 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 OR11G2Q8NGC1 345 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 OR1N1Q8NGS0 311 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 OR13J1Q8NGT2 312 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 PPP4R1Q8TF05 950 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 FAR1Q8WVX9 515 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 TM9SF4Q92544 642 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 AGAP4Q96P64 663 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 TMEM121Q9BTD3 319 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ANP32EQ9BTT0 268 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 CHRNA10Q9GZZ6 450 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 LHPPQ9H008 270 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 SYNPO2LQ9H987 977 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 ZNF160Q9HCG1 818 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 CUTCQ9NTM9 273 aa7.76□□□□□ -1.17
VIM-202ENST00000421459 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms