RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZNF534Q76KX8 674 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 VRK3Q8IV63 474 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 SLC22A15Q8IZD6 547 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 DNAAF3Q8N9W5 541 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 LMNTD1Q8N9Z9 388 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 LINC01555Q8NAE3 123 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 INPP5DQ92835 1189 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 ZNF778Q96MU6 729 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 MENTQ9BUN1 341 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
RPS28-201ENST00000417088 ATP13A2Q9NQ11 1180 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 WIPF3A6NGB9 483 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ERI2A8K979 691 aaKnown RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 KLHL41O60662 606 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 GPC4O75487 556 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 IPO13O94829 963 aaKnown RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 SUN1O94901 812 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ITGAXP20702 1163 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ALAS2P22557 587 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ACVR1Q04771 509 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 HSPA14Q0VDF9 509 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 GRB7Q14451 532 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 SEMA3AQ14563 771 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 CYP2A13Q16696 494 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 AFTPHQ6ULP2 937 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 KIAA1328Q86T90 577 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 MCATQ8IVS2 390 aaKnown RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 C2orf73Q8N5S3 287 aaPredicted RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 OR4L1Q8NH43 312 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 LKAAEAR1Q8TD35 194 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ATG4AQ8WYN0 398 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 MRFAP1L1Q96HT8 127 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 IL17FQ96PD4 163 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 RANBP9Q96S59 729 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 TTC1Q99614 292 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ILKAPQ9H0C8 392 aaPredicted RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 ETNK1Q9HBU6 452 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 CIDEBQ9UHD4 219 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 ERRFI1Q9UJM3 462 aaPredicted RBP14.24□□□□□ -0.13
RPS28-201ENST00000417088 RIMKLBQ9ULI2 386 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 CENPEQ02224 2701 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 POLEQ07864 2286 aa14.24□□□□□ -0.13
RPS28-201ENST00000417088 MYO9AB2RTY4 2548 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 CNTRLQ7Z7A1 2325 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 A0A0U1RQJ8 604 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 IQCF5A8MTL0 148 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 F8W8V4 182 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 AGPSO00116 658 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 ONECUT2O95948 504 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 GAS8O95995 478 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 LDLRP01130 860 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 CD9P21926 228 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 ADRA1DP25100 572 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 STIP1P31948 543 aaKnown RBP14.23□□□□□ -0.13
RPS28-201ENST00000417088 ARSFP54793 590 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 Q6ZS92 163 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 TTLL10Q6ZVT0 673 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 OVCH1Q7RTY7 1134 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 SYCE1Q8N0S2 351 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 ZADH2Q8N4Q0 377 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 CFAP61Q8NHU2 1237 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 TM9SF4Q92544 642 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 DLG3Q92796 817 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 FKBP10Q96AY3 582 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 NACC2Q96BF6 587 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 HES6Q96HZ4 224 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 CARD6Q9BX69 1037 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 NTNG1Q9Y2I2 539 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 ITPR2Q14571 2701 aa14.23□□□□□ -0.13
RPS28-201ENST00000417088 CACNA1DQ01668 2161 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 A0A1B0GX78 115 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 S1PR4O95977 384 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 MMP11P24347 488 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 MCM3P25205 808 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 FDFT1P37268 417 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 AIMP2Q13155 320 aaKnown RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 OASLQ15646 514 aaKnown RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 FASTKD1Q53R41 847 aaKnown RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 FCRL6Q6DN72 434 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 FIGLAQ6QHK4 219 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 UNC5DQ6UXZ4 953 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 COX15Q7KZN9 410 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 MAMDC2Q7Z304 686 aaPredicted RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 CUZD1Q86UP6 607 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 TAX1BP1Q86VP1 789 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 DCUN1D3Q8IWE4 304 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 KRT222Q8N1A0 295 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 OR2L8Q8NGY9 312 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 ASZ1Q8WWH4 475 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 SLC22A18Q96BI1 424 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 SPSB2Q99619 263 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 BARD1Q99728 777 aaKnown RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 SLC6A20Q9NP91 592 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 FBXL4Q9UKA2 621 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 PCDHGA10Q9Y5H3 936 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 COPG1Q9Y678 874 aaKnown RBP14.22□□□□□ -0.13
RPS28-201ENST00000417088 MDC1Q14676 2089 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms