RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CCSAPQ6IQ19 270 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 SHQ1Q6PI26 577 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 SPESP1Q6UW49 350 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PHACTR4Q8IZ21 702 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 RBFAQ8N0V3 343 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 FAR1Q8WVX9 515 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 OR52E6Q96RD3 313 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 MYOCQ99972 504 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CIPCQ9C0C6 399 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 NSUN3Q9H649 340 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 RMND5AQ9H871 391 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 LATS2Q9NRM7 1088 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 C1orf109Q9NX04 203 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ELOVL2Q9NXB9 296 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ERVK-18Q9QC07 812 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 POU2F3Q9UKI9 436 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ZNF490Q9ULM2 529 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 NOD1Q9Y239 953 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 NUP214P35658 2090 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 MANBAO00462 879 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 WNT9AO14904 365 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PARNO95453 639 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 OXSR1O95747 527 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 CD160O95971 181 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PRPS2P11908 318 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ACVR2AP27037 513 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 FMO3P31513 532 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 MAGEA2P43356 314 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CLDN8P56748 225 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 NCS1P62166 190 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ARF5P84085 180 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 ABHD18Q0P651 414 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 KEAP1Q14145 624 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PAGE2BQ5JRK9 111 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 RNF219Q5W0B1 726 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 MSANTD1Q6ZTZ1 278 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 GALNT5Q7Z7M9 940 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 DENND1CQ8IV53 801 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 TMEM132CQ8N3T6 1108 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 Q8N9G6 341 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 RPL3LQ92901 407 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 FAM120BQ96EK7 910 aaKnown RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 CPPED1Q9BRF8 314 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 GPR63Q9BZJ6 419 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 GPR62Q9BZJ7 368 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 CRISPLD1Q9H336 500 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 SLCO3A1Q9UIG8 710 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 TMEFF2Q9UIK5 374 aaPredicted RBP9.57□□□□□ -0.88
CD44-206ENST00000415148 TPRKBQ9Y3C4 175 aa9.57□□□□□ -0.88
CD44-206ENST00000415148 VWA8A3KMH1 1905 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 PER2O15055 1255 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 E2F6O75461 281 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 GABARAPO95166 117 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 KRT6AP02538 564 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 KRT6BP04259 564 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 BMP1P13497 986 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CYP4B1P13584 511 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 EPB42P16452 691 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ITGB6P18564 788 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 KRT6CP48668 564 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ARHGDIAP52565 204 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ELAVL2Q12926 359 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 DUSP4Q13115 394 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 RAPSNQ13702 412 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 LRRC8DQ7L1W4 858 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SNX20Q7Z614 316 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SERPINA9Q86WD7 417 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CHPFQ8IZ52 775 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 PCSK9Q8NBP7 692 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 REXO5Q96IC2 774 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 ZNF641Q96N77 438 aaPredicted RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 EGFL8Q99944 293 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SIAEQ9HAT2 523 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 TMEM161AQ9NX61 479 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 WWOXQ9NZC7 414 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 KLHL42Q9P2K6 505 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 LHX3Q9UBR4 397 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SAMD4AQ9UPU9 718 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 PCDHB14Q9Y5E9 798 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 NPIPB8E9PQR5 432 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ARVCFO00192 962 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 BCKDKO14874 412 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CNOT3O75175 753 aaKnown RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 SLC25A14O95258 325 aaPredicted RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 CCNDBP1O95273 360 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 GUCA1CO95843 209 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SERPINA1P01009 418 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CBSLP0DN79 551 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 ACPPP15309 386 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 HOXB9P17482 250 aaPredicted RBP9.56□□□□□ -0.88
CD44-206ENST00000415148 PRPH2P23942 346 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 CBSP35520 551 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 SERPINB10P48595 397 aa9.56□□□□□ -0.88
CD44-206ENST00000415148 MASP1P48740 699 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms