RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	DEPDC7	Q96QD5	511 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	RUFY1	Q96T51	708 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	PKP4	Q99569	1192 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	NUDT22	Q9BRQ3	303 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	MENT	Q9BUN1	341 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	UNK	Q9C0B0	810 aa	Known RBP	12.75	□□□□□ -0.37
SF1-206	ENST00000413725	IGSF5	Q9NSI5	407 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	PCMTD2	Q9NV79	361 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	ARL15	Q9NXU5	204 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	EURL	Q9NYK6	297 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	EPHA6	Q9UF33	1036 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	LGALS13	Q9UHV8	139 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	OARD1	Q9Y530	152 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	ENTPD2	Q9Y5L3	495 aa		12.75	□□□□□ -0.37
SF1-206	ENST00000413725	KRT87P	A6NCN2	255 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	TMX2-CTNND1	H3BSU7	103 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	BTN3A3	O00478	584 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CAPN5	O15484	640 aa	Predicted RBP	12.74	□□□□□ -0.37
SF1-206	ENST00000413725	SLC16A8	O95907	504 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	MT-CO3	P00414	261 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	S100B	P04271	92 aa	Predicted RBP	12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ANXA5	P08758	320 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	TPBGL	P0DKB5	382 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ERG	P11308	486 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	H2AFX	P16104	143 aa	Predicted RBP	12.74	□□□□□ -0.37
SF1-206	ENST00000413725	GMPR	P36959	345 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	PNLIPRP1	P54315	467 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CDKL1	Q00532	357 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ZNF844	Q08AG5	666 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	DLG1	Q12959	904 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CASP8	Q14790	479 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	KIR2DS3	Q14952	304 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ACAP2	Q15057	778 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CYP2A13	Q16696	494 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	PPP1R3A	Q16821	1122 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CEP85L	Q5SZL2	805 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CDCP2	Q5VXM1	449 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ISCA2	Q86U28	154 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	TMPRSS12	Q86WS5	348 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	GPSM1	Q86YR5	675 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	SYTL1	Q8IYJ3	562 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ADGRF3	Q8IZF5	1079 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CYP4X1	Q8N118	509 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	HMGCLL1	Q8TB92	370 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ATL1	Q8WXF7	558 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	SMPDL3A	Q92484	453 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	SLC22A18	Q96BI1	424 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	PTER	Q96BW5	349 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	SCYL1	Q96KG9	808 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CD180	Q99467	661 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ALG9	Q9H6U8	611 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	UTP6	Q9NYH9	597 aa	Known RBP	12.74	□□□□□ -0.37
SF1-206	ENST00000413725	ACTR10	Q9NZ32	417 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	IKZF3	Q9UKT9	509 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	RNF112	Q9ULX5	631 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	CLCA2	Q9UQC9	943 aa		12.74	□□□□□ -0.37
SF1-206	ENST00000413725	UQCRHL	A0A096LP55	91 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	TLCD2	A6NGC4	264 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	SYCE1L	A8MT33	242 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	ISM1	B1AKI9	464 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	GOLGA8R	I6L899	631 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	CASC3	O15234	703 aa	Known RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	RGS16	O15492	202 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	KERA	O60938	352 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	CS	O75390	466 aa	Known RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	GUCA1C	O95843	209 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	C9	P02748	559 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	UQCRH	P07919	91 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	PYGB	P11216	843 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	HOXB3	P14651	431 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	JUP	P14923	745 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	IMPA1	P29218	277 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	GLRB	P48167	497 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	INHBC	P55103	352 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	GFER	P55789	205 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	CFHR1	Q03591	330 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	TSTA3	Q13630	321 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	OR4D1	Q15615	310 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	SNAP47	Q5SQN1	464 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	PHF19	Q5T6S3	580 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	MBOAT1	Q6ZNC8	495 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	CLEC14A	Q86T13	490 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	TAX1BP1	Q86VP1	789 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	CACTIN-AS1	Q8N1I8	211 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	PLD6	Q8N2A8	252 aa	Known RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	TCAIM	Q8N3R3	496 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	RHEBL1	Q8TAI7	183 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	DENND1A	Q8TEH3	1009 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	EXT2	Q93063	718 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	FBXL8	Q96CD0	374 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	GRAMD1A	Q96CP6	724 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	NRTN	Q99748	197 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	EGFL8	Q99944	293 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	STRADB	Q9C0K7	418 aa		12.73	□□□□□ -0.37
SF1-206	ENST00000413725	STOX2	Q9P2F5	926 aa	Predicted RBP	12.73	□□□□□ -0.37
SF1-206	ENST00000413725	KLHL3	Q9UH77	587 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms