RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PRDM1O75626 825 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 TPPPO94811 219 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 OR2C1O95371 312 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 TRUB2O95900 331 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 PRLRP16471 622 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 PDHA2P29803 388 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 OXTRP30559 389 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 MAPK4P31152 587 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 RPL21P46778 160 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 HLCSP50747 726 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 CYCSP99999 105 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 IKQ13123 557 aaPredicted RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 RFTN1Q14699 578 aaPredicted RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 C3AR1Q16581 482 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 TSTQ16762 297 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZSCAN23Q3MJ62 389 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM98BQ52LJ0 330 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 FHL5Q5TD97 284 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 C20orf194Q5TEA3 1177 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 JADE1Q6IE81 842 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 FRRS1Q6ZNA5 592 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 CFAP206Q8IYR0 622 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDK20Q8IZL9 346 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 NIPA2Q8N8Q9 360 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 SGCDQ92629 289 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 TRIM63Q969Q1 353 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 NUS1Q96E22 293 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 NUDCD1Q96RS6 583 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 OLFM1Q99784 485 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 Q9N2K0 584 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 TNFRSF19Q9NS68 423 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 LUZP4Q9P127 313 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 CORO1CQ9ULV4 474 aaPredicted RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 PCDH11YQ9BZA8 1340 aa1.08□□□□□ -2.24
RNU2-55P-201ENST00000411146 ECE2O60344 883 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 PEX14O75381 377 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZWINTO95229 277 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 VTNP04004 478 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 HSPA8P11142 646 aaKnown RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 SLC2A2P11168 524 aaPredicted RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MMP9P14780 707 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 GABRB1P18505 474 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 DRD3P35462 400 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 CAMPP49913 170 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 KHKP50053 298 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 PRELPP51888 382 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 HNRNPA3P51991 378 aaKnown RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MAZP56270 477 aaKnown RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 OS9Q13438 667 aaPredicted RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ITPK1Q13572 414 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF74Q16587 644 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 UGT3A1Q6NUS8 523 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 CCBE1Q6UXH8 406 aaPredicted RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 NOL8Q76FK4 1167 aaKnown RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 TMPRSS11BQ86T26 416 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 FAM131BQ86XD5 332 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZBED8Q8IZ13 594 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 AFAP1Q8N556 730 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MYRIPQ8NFW9 859 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 OR52N5Q8NH56 324 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MAPK15Q8TD08 544 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 SSC4DQ8WTU2 575 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MTERF3Q96E29 417 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ARSGQ96EG1 525 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 C2orf48Q96LS8 159 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF597Q96LX8 424 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ZNF285Q96NJ3 590 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 DACH2Q96NX9 599 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MAP3K3Q99759 626 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 OVOL2Q9BRP0 275 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 BTBD10Q9BSF8 475 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 URM1Q9BTM9 101 aaKnown RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 MED20Q9H944 212 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 TBC1D17Q9HA65 648 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 PREBQ9HCU5 417 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 WASH6PQ9NQA3 447 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 FGF21Q9NSA1 209 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 NDE1Q9NXR1 346 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 ANAPC11Q9NYG5 84 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 OR6C2Q9NZP2 312 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 IKZF3Q9UKT9 509 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 COMMD10Q9Y6G5 202 aa1.07□□□□□ -2.24
RNU2-55P-201ENST00000411146 LOC105371242A0A075B767 164 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 LIPT2A6NK58 231 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TLX2O43763 284 aaPredicted RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 SSX4O60224 188 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDK2AP2O75956 126 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 VENTXO95231 258 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CCNDBP1O95273 360 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 THY1P04216 161 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CLEC3BP05452 202 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CDH3P22223 829 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CAPGP40121 348 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 ARL1P40616 181 aaPredicted RBP1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 ATP4BP51164 291 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 CCR9P51686 369 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 HERV-K104P61576 105 aa1.06□□□□□ -2.24
RNU2-55P-201ENST00000411146 TFAP4Q01664 338 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms