RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ITGB5P18084 799 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ADAM8P78325 824 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SGCAQ16586 387 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 BRMS1LQ5PSV4 323 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 LRRC17Q8N6Y2 441 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 HAVCR1Q96D42 359 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SLC32A1Q9H598 525 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TVP23BQ9NYZ1 205 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 GPR34Q9UPC5 381 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ZMYM2Q9UBW7 1377 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SH3PXD2BA1X283 911 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SRCP12931 536 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CHRNA4P43681 627 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TRMT5Q32P41 509 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CNKSR3Q6P9H4 555 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 DPY19L4Q7Z388 723 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 DNAJA4Q8WW22 397 aaPredicted RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 KCNJ9Q92806 393 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ATOH1Q92858 354 aaPredicted RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 BAZ2AQ9UIF9 1905 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 PHLPP1O60346 1717 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 SEMA3DO95025 777 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 GALK2Q01415 458 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 LIPEQ05469 1076 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 HEPACAMQ14CZ8 416 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 CARD16Q5EG05 197 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 NT5DC1Q5TFE4 455 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 FIP1L1Q6UN15 594 aaKnown RBP8.25□□□□□ -1.09
SCN9A-203ENST00000409672 TAC4Q86UU9 113 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 OR10A6Q8NH74 314 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 HEXDCQ8WVB3 486 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 ASB12Q8WXK4 309 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 FANCFQ9NPI8 374 aa8.25□□□□□ -1.09
SCN9A-203ENST00000409672 STK16O75716 305 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ALG10Q5BKT4 473 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OR8K3Q8NH51 312 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FRS2Q8WU20 508 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ORAI3Q9BRQ5 295 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SNAP91O60641 907 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CNOT4O95628 575 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FAUP35544 74 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 LILRA4P59901 499 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 MEF2AQ02078 507 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CTU1Q7Z7A3 348 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SPATA7Q9P0W8 599 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 NPIPA2E9PIF3 369 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 NPIPA3F8WFD2 350 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SSX5O60225 188 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 MAFKO60675 156 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 IDO1P14902 403 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OR2B6P58173 313 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 KCNC4Q03721 635 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ST3GAL1Q11201 340 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OCLNQ16625 522 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 JAGN1Q8N5M9 183 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 RHBDD1Q8TEB9 315 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 MAP3K3Q99759 626 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 TMED9Q9BVK6 235 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 REV1Q9UBZ9 1251 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 B4GALT4O60513 344 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 AOC1P19801 751 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 VIPR1P32241 457 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 KIR3DL1P43629 444 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 S100A10P60903 97 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SLBPQ14493 270 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 WDR45BQ5MNZ6 344 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 C15orf52Q6ZUT6 534 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF808Q8N4W9 903 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 FBRSQ9HAH7 460 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 UTS2RQ9UKP6 389 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 MBD5Q9P267 1494 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 A0A1W2PQ45 241 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 A0A1W2PQY0 241 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 IGFBP5P24593 272 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 EDNRAP25101 427 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 HSD17B2P37059 387 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 GBE1Q04446 702 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 TIGD5Q53EQ6 642 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 OGFRL1Q5TC84 451 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF100Q8IYN0 542 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF567Q8N184 647 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CELF5Q8N6W0 485 aaKnown RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 BPIFB1Q8TDL5 484 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 HAS1Q92839 578 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 TRIM43Q96BQ3 446 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CSPG4P5Q96PW8 444 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 HHIPQ96QV1 700 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 SLC17A6Q9P2U8 582 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PMF1-BGLAPU3KQ54 211 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 USP31Q70CQ4 1352 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 M0R2N6 131 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 PGLSO95336 258 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 HSD3B1P14060 373 aa8.24□□□□□ -1.09
SCN9A-203ENST00000409672 ARRB1P49407 418 aaPredicted RBP8.24□□□□□ -1.09
SCN9A-203ENST00000409672 CDH15P55291 814 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms