RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CYP2A13Q16696 494 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 DCAF12Q5T6F0 453 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 GRTP1Q5TC63 336 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 ANKS6Q68DC2 871 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 MYO1HQ8N1T3 1032 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 D2HGDHQ8N465 521 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 FLVCR1-AS1Q8TAF5 88 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 DENND1AQ8TEH3 1009 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC22A18Q96BI1 424 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 LINGO1Q96FE5 620 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 TEFMQ96QE5 360 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 CYTH2Q99418 400 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 CDC42EP4Q9H3Q1 356 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 SPATA7Q9P0W8 599 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 ZMIZ1Q9ULJ6 1067 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 BTRCQ9Y297 605 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 MTO1Q9Y2Z2 717 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 B3GALT1Q9Y5Z6 326 aa19.19■□□□□ 0.66
PDLIM2-207ENST00000409417 KRT87PA6NCN2 255 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC9B1P1A6NJY1 282 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 C8GP07360 202 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 PEBP1P30086 187 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 SPRP35270 261 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 HSD17B2P37059 387 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 FOXM1Q08050 763 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 IL11RAQ14626 422 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 ARHGAP19Q14CB8 494 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 ST3GAL2Q16842 350 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 TEX35Q5T0J7 233 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 FBXO38Q6PIJ6 1188 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 EIF1ADQ8N9N8 165 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 PMEPA1Q969W9 287 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 PDLIM5Q96HC4 596 aaKnown RBP19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 GPR22Q99680 433 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 FUT8Q9BYC5 575 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 ACSS3Q9H6R3 686 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 FOXJ2Q9P0K8 574 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 PCDHB11Q9Y5F2 797 aa19.18■□□□□ 0.66
PDLIM2-207ENST00000409417 ISM1B1AKI9 464 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 POLR1CO15160 346 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC16A5O15375 505 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 ACSL3O95573 720 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 ERGP11308 486 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 ZNF37AP17032 561 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 CD82P27701 267 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC12A2P55011 1212 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 SP140Q13342 867 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 KCNAB1Q14722 419 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 EFTUD2Q15029 972 aaKnown RBP eCLIP19.17■□□□□ 0.666e-8■■■■□ 20.2
PDLIM2-207ENST00000409417 SLC5A12Q1EHB4 618 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 TMEM207Q6UWW9 146 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 CEACAM20Q6UY09 585 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 UBE2R2Q712K3 238 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 C2orf73Q8N5S3 287 aaPredicted RBP19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 LMNTD1Q8N9Z9 388 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 ZNF248Q8NDW4 579 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 MCOLN3Q8TDD5 553 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 DLG3Q92796 817 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 TSPAN17Q96FV3 270 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 TRAPPC9Q96Q05 1148 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 OR6C1Q96RD1 312 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 PKP4Q99569 1192 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 ZPBPQ9BS86 351 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC12A9Q9BXP2 914 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 POPDC3Q9HBV1 291 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 SYTL2Q9HCH5 934 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 PKD1L2Q7Z442 2459 aa19.17■□□□□ 0.66
PDLIM2-207ENST00000409417 MAP3K7O43318 606 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 FOLR1P15328 257 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 ST6GAL1P15907 406 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 EIF2S3P41091 472 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 ACY1Q03154 408 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 TMTC4Q5T4D3 741 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 UBAP2Q5T6F2 1119 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 CYB5D1Q6P9G0 228 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 TRIM73Q86UV7 250 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 TAX1BP1Q86VP1 789 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 CEP97Q8IW35 865 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 NKAPQ8N5F7 415 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 CTRCQ99895 268 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 PARVBQ9HBI1 364 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 APMAPQ9HDC9 416 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 SOHLH2Q9NX45 425 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 A0A0J9YY10 115 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 ZNF839A8K0R7 811 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 PRICKLE3O43900 615 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 FAM155BO75949 473 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 SLC16A8O95907 504 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 EBLN1P0CF75 366 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 PVRP15151 417 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 CYP2A7P20853 494 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 TUBB4BP68371 445 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 TUBB3Q13509 450 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 USP10Q14694 798 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 SMPDL3AQ92484 453 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 ANKRD7Q92527 254 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 GPAMQ9HCL2 828 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 PDE7BQ9NP56 450 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 ADAMTS6Q9UKP5 1117 aa19.16■□□□□ 0.66
PDLIM2-207ENST00000409417 PDE10AQ9Y233 779 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms