RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ALG3Q92685 438 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 SNRNP40Q96DI7 357 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 C19orf60Q96EN9 201 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 GBP5Q96PP8 586 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 ALS2CR12Q96Q35 445 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 AP1M1Q9BXS5 423 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 LRRC40Q9H9A6 602 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 SPHK1Q9NYA1 384 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 OR6C2Q9NZP2 312 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 NDOR1Q9UHB4 597 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 ITGB1BP2Q9UKP3 347 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 TDRKHQ9Y2W6 561 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 PTRH2Q9Y3E5 179 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 EPN1Q9Y6I3 576 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 PRSS21Q9Y6M0 314 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 DUSP10Q9Y6W6 482 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 FER1L5A0AVI2 2057 aa8.84□□□□□ -0.99
NIF3L1-203ENST00000409129 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
NIF3L1-203ENST00000409129 SPTBP11277 2137 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 A0A0J9YY10 115 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 SLC5A10A0PJK1 596 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 GOLGA6L9A6NEM1 432 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 MROH6A6NGR9 719 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 BTNL10A8MVZ5 291 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 ISM1B1AKI9 464 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PSMD3O43242 534 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 KRT86O43790 486 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 KDM1AO60341 852 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 AP2A1O95782 977 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 FTH1P02794 183 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 ALPPP05187 535 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 CTSBP07858 339 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 OR56A5P0C7T3 313 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 MSNP26038 577 aaKnown RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 SOX8P57073 446 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PLOD1Q02809 727 aaPredicted RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 ITIH4Q14624 930 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 MYBPC3Q14896 1274 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 SLC5A12Q1EHB4 618 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 DEFB110Q30KQ9 67 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 LYPLAL1Q5VWZ2 237 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 TLDC1Q6P9B6 456 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PACS1Q6VY07 963 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 NAPRTQ6XQN6 538 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 IQCKQ8N0W5 287 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 GALNT16Q8N428 558 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 CISD2Q8N5K1 135 aaKnown RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 ZNF655Q8N720 491 aaPredicted RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.83□□□□□ -1
NIF3L1-203ENST00000409129 OR2Y1Q8NGV0 311 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 OR5K2Q8NHB8 316 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PTERQ96BW5 349 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 TRIM5Q9C035 493 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 ZNF552Q9H707 407 aaPredicted RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 TXLNGQ9NUQ3 528 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 ASF1BQ9NVP2 202 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 P4HTMQ9NXG6 502 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 IFT80Q9P2H3 777 aaPredicted RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 DHCR7Q9UBM7 475 aaKnown RBP8.83□□□□□ -1
NIF3L1-203ENST00000409129 PLCL2Q9UPR0 1127 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 CDYLQ9Y232 598 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 B3GNT3Q9Y2A9 372 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 POLEQ07864 2286 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 MYO7BQ6PIF6 2116 aa8.83□□□□□ -1
NIF3L1-203ENST00000409129 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 ANKHD1Q8IWZ3 2542 aaKnown RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 CCDC88CQ9P219 2028 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 A0A1B0GTL3 188 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 CCDC78A2IDD5 438 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 CCDC162PA2VCL2 907 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 OR51F1A6NGY5 319 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 SOWAHDA6NJG2 315 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 ZSCAN9O15535 394 aaPredicted RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 CNOT3O75175 753 aaKnown RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 CBX6O95503 412 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 PTMAP06454 111 aaKnown RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 FOXN2P32314 431 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 MMP16P51512 607 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 KIR2DS3Q14952 304 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 NR6A1Q15406 480 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 P3H1Q32P28 736 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 NKAIN1Q4KMZ8 207 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 SYTL3Q4VX76 610 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 MRPL14Q6P1L8 145 aaKnown RBP8.82□□□□□ -1
NIF3L1-203ENST00000409129 PPP1R32Q7Z5V6 425 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 LINC00523Q86TU6 105 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 ZADH2Q8N4Q0 377 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 LRRC57Q8N9N7 239 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 PANX2Q96RD6 677 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 NDC1Q9BTX1 674 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 ATP13A2Q9NQ11 1180 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 IRAK4Q9NWZ3 460 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 IMPACTQ9P2X3 320 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 AMFRQ9UKV5 643 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 PLAGL1Q9UM63 463 aa8.82□□□□□ -1
NIF3L1-203ENST00000409129 GRID2IPA4D2P6 1211 aa8.81□□□□□ -1
NIF3L1-203ENST00000409129 F8W8V4 182 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms