RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	GYPE	P15421	78 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	GM2A	P17900	193 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ERCC2	P18074	760 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PSMA2	P25787	234 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	GARS	P41250	739 aa	Known RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PGD	P52209	483 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	POLR2F	P61218	127 aa	Known RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	DUSP2	Q05923	314 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	DPT	Q07507	201 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	IL11RA	Q14626	422 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CAMK4	Q16566	473 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MST1L	Q2TV78	715 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PYCR3	Q53H96	274 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	HSP90AA4P	Q58FG1	418 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PPP6R3	Q5H9R7	873 aa	Predicted RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ATP1A1-AS1	Q5TC04	95 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CAPRIN2	Q6IMN6	1127 aa	Known RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461		Q6ZVL8	140 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TIPARP	Q7Z3E1	657 aa	Known RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	HSD11B1L	Q7Z5J1	315 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PELI3	Q8N2H9	469 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ANKRD20A12P	Q8NF67	263 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ZNF480	Q8WV37	535 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	THAP4	Q8WY91	577 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SCRN2	Q96FV2	425 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NUDCD1	Q96RS6	583 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	BDH2	Q9BUT1	245 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SPRY4	Q9C004	299 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ENKD1	Q9H0I2	346 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	VPS16	Q9H269	839 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	RMI1	Q9H9A7	625 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	APMAP	Q9HDC9	416 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	FAM207A	Q9NSI2	230 aa	Predicted RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	VPS18	Q9P253	973 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ZNHIT2	Q9UHR6	403 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CD84	Q9UIB8	345 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	LNPEP	Q9UIQ6	1025 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CNOT11	Q9UKZ1	510 aa	Known RBP	6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TMEM98	Q9Y2Y6	226 aa		6.63	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TRPM6	Q9BX84	2022 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461		A6NCN8	305 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NPIPB15	A6NHN6	443 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	LILRA5	A6NI73	299 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CREG1	O75629	220 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MTA2	O94776	668 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	KIAA0754	O94854	1291 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NDUFA10	O95299	355 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PGLS	O95336	258 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	VIP	P01282	170 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ACP5	P13686	325 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ZNF30	P17039	623 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	AMD1	P17707	334 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NR1D1	P20393	614 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	LHCGR	P22888	699 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ECHS1	P30084	290 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ADSL	P30566	484 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SERPINB6	P35237	376 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	UQCRFS1	P47985	274 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SLC16A1	P53985	500 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PDE1B	Q01064	536 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MGAT2	Q10469	447 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PTP4A2	Q12974	167 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PIN1	Q13526	163 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	DNASE1L3	Q13609	305 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	GRM7	Q14831	915 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NOMO1	Q15155	1222 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ERMARD	Q5T6L9	678 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MARC1	Q5VT66	337 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	DPY19L2P1	Q6NXN4	242 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	IYD	Q6PHW0	289 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TMCO3	Q6UWJ1	677 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MON1B	Q7L1V2	547 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	CHST15	Q7LFX5	561 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TRIM74	Q86UV6	250 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PPP1R3B	Q86XI6	285 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PSTK	Q8IV42	348 aa	Known RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	APLF	Q8IW19	511 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	RAVER1	Q8IY67	606 aa	Known RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	ATPAF2	Q8N5M1	289 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	OR5M3	Q8NGP4	307 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	HOXB13	Q92826	284 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	OR14A2	Q96R54	314 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MCCC1	Q96RQ3	725 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MGME1	Q9BQP7	344 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SLC25A23	Q9BV35	468 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PDE7B	Q9NP56	450 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	NLRC4	Q9NPP4	1024 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TAB2	Q9NYJ8	693 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PLA2G3	Q9NZ20	509 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PCSK1N	Q9UHG2	260 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	TLK1	Q9UKI8	766 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PADI1	Q9ULC6	663 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	KCNK6	Q9Y257	313 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	PLEKHM1	Q9Y4G2	1056 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MRPS18B	Q9Y676	258 aa	Known RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SLC30A1	Q9Y6M5	507 aa		6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	SPTAN1	Q13813	2472 aa	Known RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.62	□□□□□ -1.35
CEACAM1-208	ENST00000403461	MN1	Q10571	1320 aa	Predicted RBP	6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms