RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PDE7BQ9NP56 450 aa18.56■□□□□ 0.56
RTN4-207ENST00000402434 SMYD2Q9NRG4 433 aa18.56■□□□□ 0.56
RTN4-207ENST00000402434 FAM114A2Q9NRY5 505 aa18.56■□□□□ 0.56
RTN4-207ENST00000402434 FGF21Q9NSA1 209 aa18.56■□□□□ 0.56
RTN4-207ENST00000402434 TSR3Q9UJK0 312 aaKnown RBP18.56■□□□□ 0.56
RTN4-207ENST00000402434 VWA7Q9Y334 891 aa18.56■□□□□ 0.56
RTN4-207ENST00000402434 MYO1CO00159 1063 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 C1QAP02745 245 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 CATP04040 527 aaKnown RBP18.55■□□□□ 0.56
RTN4-207ENST00000402434 MCM3P25205 808 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 ILF2Q12905 390 aaKnown RBP18.55■□□□□ 0.56
RTN4-207ENST00000402434 CYP2A13Q16696 494 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 SLC5A12Q1EHB4 618 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.55■□□□□ 0.567e-15■□□□□ 9.8
RTN4-207ENST00000402434 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.55■□□□□ 0.56
RTN4-207ENST00000402434 TMTC4Q5T4D3 741 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 HECTD2Q5U5R9 776 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 PAQR3Q6TCH7 311 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 CAPN12Q6ZSI9 719 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 STRA8Q7Z7C7 330 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 CCDC25Q86WR0 208 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 PPP1R3BQ86XI6 285 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 OR9A1PQ8NGU1 263 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 SLC22A18Q96BI1 424 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 FCRL4Q96PJ5 515 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 CHRNA10Q9GZZ6 450 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 LRRC4CQ9HCJ2 640 aa18.55■□□□□ 0.56
RTN4-207ENST00000402434 KRT87PA6NCN2 255 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 FAM159BA6NKW6 160 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 ISM1B1AKI9 464 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 PRICKLE3O43900 615 aaPredicted RBP18.54■□□□□ 0.56
RTN4-207ENST00000402434 SNRNP200O75643 2136 aaKnown RBP18.54■□□□□ 0.56
RTN4-207ENST00000402434 STK17BO94768 372 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 ERGP11308 486 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 PVRP15151 417 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 FDXRP22570 491 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 FAM45BPQ6NSW5 357 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 C19orf48Q6RUI8 117 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 RAB42Q8N4Z0 105 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 GPATCH11Q8N954 259 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 LMNTD1Q8N9Z9 388 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 OR8K5Q8NH50 307 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 FAM45AQ8TCE6 357 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 EEF1AKMT1Q8WVE0 214 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 NKD1Q969G9 470 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 ZNF501Q96CX3 271 aaPredicted RBP18.54■□□□□ 0.56
RTN4-207ENST00000402434 SYTL2Q9HCH5 934 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 SOHLH2Q9NX45 425 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 SPATA7Q9P0W8 599 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 LNPEPQ9UIQ6 1025 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 RARRES3Q9UL19 164 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 SPTBP11277 2137 aa18.54■□□□□ 0.56
RTN4-207ENST00000402434 A0A0J9YY10 115 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 CXorf49A8MYA2 514 aaPredicted RBP18.53■□□□□ 0.56
RTN4-207ENST00000402434 MAP3K7O43318 606 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 PIAS1O75925 651 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 TSPAN12O95859 305 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 DLGAP3O95886 979 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 RGS4P49798 205 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 UCNP55089 124 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 ARHGAP19Q14CB8 494 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 BROXQ5VW32 411 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 PIWIL4Q7Z3Z4 852 aaKnown RBP18.53■□□□□ 0.56
RTN4-207ENST00000402434 TRIM73Q86UV7 250 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 RELL1Q8IUW5 271 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 CDKL2Q92772 493 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 CCNL2Q96S94 520 aaPredicted RBP18.53■□□□□ 0.56
RTN4-207ENST00000402434 OLFM1Q99784 485 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 RHOJQ9H4E5 214 aa18.53■□□□□ 0.56
RTN4-207ENST00000402434 ZBTB14O43829 449 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 SPAG6O75602 509 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 FKBP9O95302 570 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 ZNF28P17035 718 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 HSD17B2P37059 387 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 MAP7Q14244 749 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 GPR19Q15760 415 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 ZIC1Q15915 447 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 COL28A1Q2UY09 1125 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 PWWP2BQ6NUJ5 590 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 TIPARPQ7Z3E1 657 aaKnown RBP18.52■□□□□ 0.56
RTN4-207ENST00000402434 C2orf73Q8N5S3 287 aaPredicted RBP18.52■□□□□ 0.56
RTN4-207ENST00000402434 C19orf47Q8N9M1 422 aaKnown RBP18.52■□□□□ 0.56
RTN4-207ENST00000402434 TCTN2Q96GX1 697 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 ELMO2Q96JJ3 720 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 PKP4Q99569 1192 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 ULBP3Q9BZM4 244 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 KLHL25Q9H0H3 589 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 TSPYL1Q9H0U9 437 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 ITPR1Q14643 2758 aa18.52■□□□□ 0.56
RTN4-207ENST00000402434 A0A1W2PPV9 198 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 SEC16AO15027 2179 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 EFSO43281 561 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 RAD1O60671 282 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 KRT37O76014 449 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 TIAF1O95411 115 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 IL2P60568 153 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 PDAP1Q13442 181 aaKnown RBP18.52■□□□□ 0.55
RTN4-207ENST00000402434 CDHR3Q6ZTQ4 885 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 CEP128Q6ZU80 1094 aa18.52■□□□□ 0.55
RTN4-207ENST00000402434 CACNA2D3Q8IZS8 1091 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms