RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 CARNMT1Q8N4J0 409 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 TTC30BQ8N4P2 665 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 GOLM1Q8NBJ4 401 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 BRI3BPQ8WY22 251 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 PYURFQ96I23 114 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 ATG10Q9H0Y0 220 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 KAT8Q9H7Z6 458 aaKnown RBP8.97□□□□□ -0.97
HPS4-203ENST00000402105 C1orf109Q9NX04 203 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 ARL15Q9NXU5 204 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 CRLS1Q9UJA2 301 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 DLGAP4Q9Y2H0 992 aa8.97□□□□□ -0.97
HPS4-203ENST00000402105 TRIP12Q14669 1992 aaPredicted RBP8.97□□□□□ -0.97
HPS4-203ENST00000402105 SPNP16150 400 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 JUNBP17275 347 aaPredicted RBP8.96□□□□□ -0.97
HPS4-203ENST00000402105 RAB15P59190 212 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 CREMQ03060 361 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 SELENBP1Q13228 472 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 TUSC3Q13454 348 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 MED22Q15528 200 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 HIST2H2ACQ16777 129 aaPredicted RBP8.96□□□□□ -0.97
HPS4-203ENST00000402105 ZNF691Q5VV52 312 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 RNF219Q5W0B1 726 aaPredicted RBP8.96□□□□□ -0.97
HPS4-203ENST00000402105 LAIR1Q6GTX8 287 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 HIPK1Q86Z02 1210 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 TMEM132CQ8N3T6 1108 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 SETD9Q8NE22 299 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 MAL2Q969L2 176 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 SH3GL1Q99961 368 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 TSEN34Q9BSV6 310 aaKnown RBP8.96□□□□□ -0.97
HPS4-203ENST00000402105 COPS4Q9BT78 406 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 REEP1Q9H902 201 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 NLE1Q9NVX2 485 aaPredicted RBP8.96□□□□□ -0.97
HPS4-203ENST00000402105 ERVK13-1Q9NX77 482 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 TAS2R16Q9NYV7 291 aa8.96□□□□□ -0.97
HPS4-203ENST00000402105 LAMA2P24043 3122 aaKnown RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 PRAMEF11O60813 436 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 GADD45AP24522 165 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 CD40LGP29965 261 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 OR1E2P47887 323 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 DAPP51397 102 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 ZNF177Q13360 481 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 TAB1Q15750 504 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 FAM217AQ8IXS0 508 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 SVOPLQ8N434 492 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 STX19Q8N4C7 294 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 OR6Q1Q8NGQ2 317 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 ZNF382Q96SR6 550 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 BEX2Q9BXY8 128 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 PMF1-BGLAPU3KQ54 211 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 ANKRD66B4E2M5 251 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 TAF4O00268 1085 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 STX16O14662 325 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 TNFRSF10BO14763 440 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 PRAMEF1O95521 474 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 BCKDHAP12694 445 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 EPB42P16452 691 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 ZNF24P17028 368 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 CLK3P49761 638 aaKnown RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 RGS4P49798 205 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 RPP38P78345 283 aaKnown RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 SLC14A1Q13336 389 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 BOP1Q14137 746 aaKnown RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 STEAP3Q658P3 488 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 SERPINA9Q86WD7 417 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 SLC44A2Q8IWA5 706 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 ATL1Q8WXF7 558 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 KATNAL1Q9BW62 490 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 FAM126AQ9BYI3 521 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 PRRG3Q9BZD7 231 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 CEP44Q9C0F1 390 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 TP63Q9H3D4 680 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 FBXO44Q9H4M3 255 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 AKIP1Q9NQ31 210 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 AASDHPPTQ9NRN7 309 aa8.96□□□□□ -0.98
HPS4-203ENST00000402105 SCHIP1Q9P0W5 487 aaPredicted RBP8.96□□□□□ -0.98
HPS4-203ENST00000402105 TRIM64A6NGJ6 449 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 SCELO95171 688 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 ALOX5P09917 674 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 HOXB8P17481 243 aaPredicted RBP8.95□□□□□ -0.98
HPS4-203ENST00000402105 ITIH1P19827 911 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 RHOAP61586 193 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 RPS14P62263 151 aaKnown RBP8.95□□□□□ -0.98
HPS4-203ENST00000402105 PCBP1Q15365 356 aaKnown RBP eCLIP8.95□□□□□ -0.98
HPS4-203ENST00000402105 PARP15Q460N3 678 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.95□□□□□ -0.98
HPS4-203ENST00000402105 OR2T5Q6IEZ7 315 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 CACTIN-AS1Q8N1I8 211 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 CELF2-AS1Q8N7Q2 184 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 OR2T29Q8NH02 315 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 LKAAEAR1Q8TD35 194 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 TSPEARQ8WU66 669 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 ZNF641Q96N77 438 aaPredicted RBP8.95□□□□□ -0.98
HPS4-203ENST00000402105 ADGRE3Q9BY15 652 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 OR51E2Q9H255 320 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 PRDM5Q9NQX1 630 aaPredicted RBP8.95□□□□□ -0.98
HPS4-203ENST00000402105 TLR8Q9NR97 1041 aaKnown RBP8.95□□□□□ -0.98
HPS4-203ENST00000402105 ELOVL2Q9NXB9 296 aa8.95□□□□□ -0.98
HPS4-203ENST00000402105 EHD3Q9NZN3 535 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms